Protein–RNA interactions for Protein: Q8N5V2

NGEF, Ephexin-1, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGEFQ8N5V2 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
NGEFQ8N5V2 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
NGEFQ8N5V2 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NGEFQ8N5V2 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NGEFQ8N5V2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NGEFQ8N5V2 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NGEFQ8N5V2 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NGEFQ8N5V2 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NGEFQ8N5V2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
NGEFQ8N5V2 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
NGEFQ8N5V2 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NGEFQ8N5V2 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NGEFQ8N5V2 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NGEFQ8N5V2 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC20.1■□□□□ 0.81
NGEFQ8N5V2 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NGEFQ8N5V2 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
NGEFQ8N5V2 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC20.1■□□□□ 0.81
NGEFQ8N5V2 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NGEFQ8N5V2 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
NGEFQ8N5V2 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NGEFQ8N5V2 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NGEFQ8N5V2 BRF1-202ENST00000379932 884 ntTSL 5 BASIC20.1■□□□□ 0.81
NGEFQ8N5V2 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NGEFQ8N5V2 AL139094.1-201ENST00000405549 1188 ntBASIC20.1■□□□□ 0.81
NGEFQ8N5V2 BCRP2-202ENST00000447763 634 ntBASIC20.1■□□□□ 0.81
NGEFQ8N5V2 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC20.1■□□□□ 0.81
NGEFQ8N5V2 BCRP6-201ENST00000510112 632 ntBASIC20.1■□□□□ 0.81
NGEFQ8N5V2 BCRP7-201ENST00000511549 544 ntBASIC20.1■□□□□ 0.81
NGEFQ8N5V2 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC20.1■□□□□ 0.81
NGEFQ8N5V2 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
NGEFQ8N5V2 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NGEFQ8N5V2 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NGEFQ8N5V2 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NGEFQ8N5V2 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
NGEFQ8N5V2 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NGEFQ8N5V2 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NGEFQ8N5V2 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NGEFQ8N5V2 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC20.1■□□□□ 0.81
NGEFQ8N5V2 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
NGEFQ8N5V2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
NGEFQ8N5V2 KRT8P14-201ENST00000414254 1442 ntBASIC20.1■□□□□ 0.81
NGEFQ8N5V2 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NGEFQ8N5V2 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NGEFQ8N5V2 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NGEFQ8N5V2 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NGEFQ8N5V2 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NGEFQ8N5V2 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NGEFQ8N5V2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NGEFQ8N5V2 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NGEFQ8N5V2 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NGEFQ8N5V2 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NGEFQ8N5V2 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NGEFQ8N5V2 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC20.09■□□□□ 0.81
NGEFQ8N5V2 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NGEFQ8N5V2 AL162726.2-201ENST00000438986 1017 ntBASIC20.09■□□□□ 0.81
NGEFQ8N5V2 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC20.09■□□□□ 0.81
NGEFQ8N5V2 KRT223P-202ENST00000449164 1292 ntBASIC20.09■□□□□ 0.81
NGEFQ8N5V2 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC20.09■□□□□ 0.81
NGEFQ8N5V2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NGEFQ8N5V2 MIR5189-201ENST00000577370 114 ntBASIC20.09■□□□□ 0.81
NGEFQ8N5V2 IFT20-206ENST00000578122 834 ntTSL 2 BASIC20.09■□□□□ 0.81
NGEFQ8N5V2 IFT20-208ENST00000578985 831 ntTSL 3 BASIC20.09■□□□□ 0.81
NGEFQ8N5V2 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC20.09■□□□□ 0.81
NGEFQ8N5V2 AC133552.6-201ENST00000613406 534 ntBASIC20.09■□□□□ 0.81
NGEFQ8N5V2 COX11-210ENST00000639671 696 ntBASIC20.09■□□□□ 0.81
NGEFQ8N5V2 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
NGEFQ8N5V2 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NGEFQ8N5V2 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NGEFQ8N5V2 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC20.09■□□□□ 0.81
NGEFQ8N5V2 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NGEFQ8N5V2 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NGEFQ8N5V2 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC20.09■□□□□ 0.81
NGEFQ8N5V2 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NGEFQ8N5V2 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
NGEFQ8N5V2 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC20.09■□□□□ 0.81
NGEFQ8N5V2 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC20.08■□□□□ 0.81
NGEFQ8N5V2 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC20.08■□□□□ 0.81
NGEFQ8N5V2 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
NGEFQ8N5V2 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC20.08■□□□□ 0.81
NGEFQ8N5V2 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC20.08■□□□□ 0.81
NGEFQ8N5V2 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NGEFQ8N5V2 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NGEFQ8N5V2 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC20.08■□□□□ 0.81
NGEFQ8N5V2 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NGEFQ8N5V2 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NGEFQ8N5V2 AL596257.1-201ENST00000641463 2694 ntBASIC20.08■□□□□ 0.81
NGEFQ8N5V2 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC20.08■□□□□ 0.81
NGEFQ8N5V2 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC20.08■□□□□ 0.81
NGEFQ8N5V2 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NGEFQ8N5V2 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC20.08■□□□□ 0.81
NGEFQ8N5V2 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
NGEFQ8N5V2 BNIP3P42-201ENST00000454982 569 ntBASIC20.08■□□□□ 0.81
NGEFQ8N5V2 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC20.08■□□□□ 0.81
NGEFQ8N5V2 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC20.08■□□□□ 0.81
NGEFQ8N5V2 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC20.08■□□□□ 0.81
NGEFQ8N5V2 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC20.08■□□□□ 0.81
NGEFQ8N5V2 BNIP3P29-201ENST00000598302 571 ntBASIC20.08■□□□□ 0.81
NGEFQ8N5V2 AC233724.13-201ENST00000598383 410 ntBASIC20.08■□□□□ 0.81
NGEFQ8N5V2 AC011447.5-201ENST00000616168 564 ntBASIC20.08■□□□□ 0.81
NGEFQ8N5V2 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms