Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 MIR4525-201ENST00000580000 75 ntBASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PHTF2Q8N3S3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 AC026954.1-201ENST00000429771 1293 ntBASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 AL355994.2-201ENST00000447882 704 ntBASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 CICP13-201ENST00000422015 2789 ntBASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
PHTF2Q8N3S3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 AC138035.3-201ENST00000622706 2791 ntBASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 CNN2P8-201ENST00000421872 913 ntBASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 AP001582.1-201ENST00000525856 295 ntBASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
PHTF2Q8N3S3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms