Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC100850.1-201ENST00000506768 649 ntBASIC23.58■■□□□ 1.36
VPS8Q8N3P4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
VPS8Q8N3P4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC23.58■■□□□ 1.36
VPS8Q8N3P4 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC23.58■■□□□ 1.36
VPS8Q8N3P4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC23.58■■□□□ 1.36
VPS8Q8N3P4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC23.58■■□□□ 1.36
VPS8Q8N3P4 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC23.58■■□□□ 1.36
VPS8Q8N3P4 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC23.58■■□□□ 1.36
VPS8Q8N3P4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
VPS8Q8N3P4 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
VPS8Q8N3P4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
VPS8Q8N3P4 AC007292.2-201ENST00000593524 1812 ntBASIC23.57■■□□□ 1.36
VPS8Q8N3P4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
VPS8Q8N3P4 AL590440.2-201ENST00000641973 1595 ntBASIC23.57■■□□□ 1.36
VPS8Q8N3P4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC23.57■■□□□ 1.36
VPS8Q8N3P4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
VPS8Q8N3P4 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
VPS8Q8N3P4 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
VPS8Q8N3P4 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
VPS8Q8N3P4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC23.57■■□□□ 1.36
VPS8Q8N3P4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
VPS8Q8N3P4 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC23.57■■□□□ 1.36
VPS8Q8N3P4 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC23.57■■□□□ 1.36
VPS8Q8N3P4 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC23.57■■□□□ 1.36
VPS8Q8N3P4 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC23.57■■□□□ 1.36
VPS8Q8N3P4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
VPS8Q8N3P4 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC23.57■■□□□ 1.36
VPS8Q8N3P4 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
VPS8Q8N3P4 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
VPS8Q8N3P4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
VPS8Q8N3P4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
VPS8Q8N3P4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
VPS8Q8N3P4 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
VPS8Q8N3P4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 AC046158.3-201ENST00000624947 2558 ntBASIC23.56■■□□□ 1.36
VPS8Q8N3P4 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 RPS3-201ENST00000278572 907 ntTSL 3 BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 APOA2-204ENST00000464492 530 ntTSL 3 BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 AC132192.2-201ENST00000596206 1147 ntBASIC23.56■■□□□ 1.36
VPS8Q8N3P4 AC244157.2-201ENST00000616239 1006 ntBASIC23.56■■□□□ 1.36
VPS8Q8N3P4 AL008638.5-201ENST00000623814 1298 ntBASIC23.56■■□□□ 1.36
VPS8Q8N3P4 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
VPS8Q8N3P4 SALL4P5-201ENST00000419001 1760 ntBASIC23.55■■□□□ 1.36
VPS8Q8N3P4 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC23.55■■□□□ 1.36
VPS8Q8N3P4 GPI-205ENST00000586425 1799 ntTSL 5 BASIC23.55■■□□□ 1.36
VPS8Q8N3P4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
VPS8Q8N3P4 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC23.55■■□□□ 1.36
VPS8Q8N3P4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
VPS8Q8N3P4 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC23.55■■□□□ 1.36
VPS8Q8N3P4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
VPS8Q8N3P4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
VPS8Q8N3P4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC23.55■■□□□ 1.36
VPS8Q8N3P4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
VPS8Q8N3P4 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
VPS8Q8N3P4 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
VPS8Q8N3P4 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
VPS8Q8N3P4 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC23.55■■□□□ 1.36
VPS8Q8N3P4 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC23.55■■□□□ 1.36
VPS8Q8N3P4 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC23.55■■□□□ 1.36
VPS8Q8N3P4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
VPS8Q8N3P4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
VPS8Q8N3P4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
VPS8Q8N3P4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
VPS8Q8N3P4 AC011270.2-201ENST00000624293 2550 ntBASIC23.55■■□□□ 1.36
VPS8Q8N3P4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
VPS8Q8N3P4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC23.55■■□□□ 1.36
VPS8Q8N3P4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
VPS8Q8N3P4 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
VPS8Q8N3P4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC23.55■■□□□ 1.36
VPS8Q8N3P4 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 HARS-202ENST00000415192 1401 ntTSL 2 BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
VPS8Q8N3P4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms