Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 GHSR-202ENST00000427970 912 ntBASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 TSPY16P-201ENST00000449843 468 ntBASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 RN7SL399P-201ENST00000471648 279 ntBASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 FAM86LP-201ENST00000478302 853 ntBASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 AC036164.1-201ENST00000570544 333 ntBASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 ACTG1P22-201ENST00000603793 1099 ntBASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 AL645728.2-202ENST00000641679 227 ntBASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 AP000845.1-201ENST00000581677 2131 ntBASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.51□□□□□ -0.09
CCDC116Q8IYX3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 AC009118.2-201ENST00000613275 655 ntBASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 AJ011932.1-201ENST00000621707 465 ntBASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CCDC116Q8IYX3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms