Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 IGHV3-42-201ENST00000520410 361 ntBASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 ZNF890P-202ENST00000530367 1156 ntBASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 AC000095.1-201ENST00000603208 874 ntBASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 SF1-209ENST00000433274 2317 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 AC015656.1-201ENST00000624209 3578 ntBASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCDC83Q8IWF9 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 AC114501.2-201ENST00000439631 535 ntBASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 AL158212.4-201ENST00000624062 1286 ntBASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC83Q8IWF9 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 GOLGA8DP-202ENST00000341390 2184 ntBASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 METTL21AP1-201ENST00000438852 635 ntBASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 TIMM17BP1-201ENST00000545713 516 ntBASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 AC009407.1-201ENST00000568958 598 ntBASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
CCDC83Q8IWF9 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms