Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
CRLF3Q8IUI8 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.42■□□□□ 0.06
CRLF3Q8IUI8 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CRLF3Q8IUI8 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CRLF3Q8IUI8 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CRLF3Q8IUI8 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CRLF3Q8IUI8 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 AC015656.1-201ENST00000624209 3578 ntBASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 AC005840.4-201ENST00000541242 2494 ntBASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 FAM58DP-201ENST00000428076 619 ntBASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 AC025678.2-201ENST00000562061 970 ntBASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 UXT-AS1-201ENST00000590504 1525 ntBASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CRLF3Q8IUI8 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 LINC01225-203ENST00000563550 1244 ntBASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 AL138918.1-201ENST00000568306 659 ntBASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 BX640514.1-201ENST00000583223 1918 ntBASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 AC087386.2-201ENST00000623212 4637 ntBASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CRLF3Q8IUI8 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CRLF3Q8IUI8 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.39■□□□□ 0.05
CRLF3Q8IUI8 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.39■□□□□ 0.05
CRLF3Q8IUI8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
CRLF3Q8IUI8 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CRLF3Q8IUI8 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CRLF3Q8IUI8 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms