Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 C2orf69P2-201ENST00000562032 1123 ntBASIC17.05■□□□□ 0.32
TRIM50Q86XT4 AP006547.1-201ENST00000563435 692 ntBASIC17.05■□□□□ 0.32
TRIM50Q86XT4 ENPP7P14-201ENST00000621765 1040 ntBASIC17.05■□□□□ 0.32
TRIM50Q86XT4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 AL157414.3-201ENST00000624276 1954 ntBASIC17.05■□□□□ 0.32
TRIM50Q86XT4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.05■□□□□ 0.32
TRIM50Q86XT4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRIM50Q86XT4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 AL645937.2-201ENST00000396808 931 ntBASIC17.04■□□□□ 0.32
TRIM50Q86XT4 HLA-K-203ENST00000430151 1046 ntBASIC17.04■□□□□ 0.32
TRIM50Q86XT4 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.04■□□□□ 0.32
TRIM50Q86XT4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 AL118558.3-201ENST00000607414 1079 ntBASIC17.03■□□□□ 0.32
TRIM50Q86XT4 AC005695.3-201ENST00000614522 232 ntBASIC17.03■□□□□ 0.32
TRIM50Q86XT4 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRIM50Q86XT4 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TRIM50Q86XT4 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.02■□□□□ 0.32
TRIM50Q86XT4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms