Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 RN7SKP230-201ENST00000365642 335 ntBASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 AC015909.3-201ENST00000572855 1794 ntBASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 RPS15-202ENST00000585665 467 ntTSL 3 BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 AC023090.2-201ENST00000625182 2110 ntBASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 AMT-239ENST00000636865 1914 ntTSL 5 BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 HYMAI-201ENST00000635591 3347 ntBASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 AC008723.1-201ENST00000506922 207 ntBASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 RN7SL163P-201ENST00000583100 276 ntBASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 AC138466.4-201ENST00000623965 852 ntBASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC9.21□□□□□ -0.94
VPS13BQ7Z7G8 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 AC078875.1-201ENST00000431907 724 ntBASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 AL157407.1-201ENST00000435784 904 ntBASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 AL135901.1-201ENST00000451812 333 ntBASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 MRPL22P1-201ENST00000505398 616 ntBASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 AL008718.2-201ENST00000609206 1313 ntBASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 UROS-201ENST00000368774 744 ntTSL 2 BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 SERF2-209ENST00000409646 559 ntTSL 4 BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 AC107464.3-201ENST00000609172 737 ntBASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
VPS13BQ7Z7G8 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
VPS13BQ7Z7G8 SHC1P1-201ENST00000425230 1745 ntBASIC9.19□□□□□ -0.94
VPS13BQ7Z7G8 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC9.19□□□□□ -0.94
VPS13BQ7Z7G8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC9.19□□□□□ -0.94
VPS13BQ7Z7G8 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms