Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 AL132655.2-201ENST00000596276 594 ntBASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 AP003680.1-201ENST00000598970 3660 ntBASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 REXO1L1P-202ENST00000608646 1974 ntBASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CHMP1BQ7LBR1 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 MIR661-201ENST00000384842 89 ntBASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 DFFBP1-201ENST00000433250 979 ntBASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 SPTLC1P1-201ENST00000447199 261 ntBASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 AC023908.3-201ENST00000564211 3047 ntBASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 AC126335.2-201ENST00000623362 4637 ntBASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 AC022532.1-201ENST00000624563 1728 ntBASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CHMP1BQ7LBR1 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CHMP1BQ7LBR1 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms