Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 CDC23-208ENST00000505120 455 ntTSL 3 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 ETV2-207ENST00000619399 994 ntTSL 5 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 ALG1L13P-202ENST00000519320 584 ntBASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 FRMPD2B-201ENST00000431305 1347 ntBASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 BX088702.1-201ENST00000610784 235 ntBASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 HELLS-212ENST00000630929 400 ntTSL 5 BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC9.98□□□□□ -0.81
VPS13DQ5THJ4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 API5-203ENST00000455725 2257 ntTSL 2 BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 AC244250.3-201ENST00000620749 366 ntBASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 AC092299.1-201ENST00000632679 757 ntBASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
VPS13DQ5THJ4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms