Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LGSNQ5TDP6 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LGSNQ5TDP6 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LGSNQ5TDP6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
LGSNQ5TDP6 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC15.53■□□□□ 0.08
LGSNQ5TDP6 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LGSNQ5TDP6 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.53■□□□□ 0.08
LGSNQ5TDP6 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LGSNQ5TDP6 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.52■□□□□ 0.08
LGSNQ5TDP6 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LGSNQ5TDP6 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LGSNQ5TDP6 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LGSNQ5TDP6 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.52■□□□□ 0.08
LGSNQ5TDP6 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LGSNQ5TDP6 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LGSNQ5TDP6 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LGSNQ5TDP6 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LGSNQ5TDP6 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.52■□□□□ 0.08
LGSNQ5TDP6 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LGSNQ5TDP6 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LGSNQ5TDP6 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC15.52■□□□□ 0.08
LGSNQ5TDP6 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.52■□□□□ 0.08
LGSNQ5TDP6 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LGSNQ5TDP6 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
LGSNQ5TDP6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.52■□□□□ 0.08
LGSNQ5TDP6 AL133267.1-201ENST00000398220 340 ntBASIC15.52■□□□□ 0.08
LGSNQ5TDP6 AC023274.1-201ENST00000418278 595 ntBASIC15.52■□□□□ 0.08
LGSNQ5TDP6 HIST3H2BA-201ENST00000436555 524 ntBASIC15.52■□□□□ 0.08
LGSNQ5TDP6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.52■□□□□ 0.08
LGSNQ5TDP6 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.52■□□□□ 0.08
LGSNQ5TDP6 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.52■□□□□ 0.08
LGSNQ5TDP6 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.52■□□□□ 0.08
LGSNQ5TDP6 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.52■□□□□ 0.08
LGSNQ5TDP6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.52■□□□□ 0.08
LGSNQ5TDP6 SLC25A1P1-201ENST00000528351 927 ntBASIC15.52■□□□□ 0.08
LGSNQ5TDP6 AC040169.1-201ENST00000565382 521 ntBASIC15.52■□□□□ 0.08
LGSNQ5TDP6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.52■□□□□ 0.08
LGSNQ5TDP6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.52■□□□□ 0.08
LGSNQ5TDP6 AC015910.1-201ENST00000579400 975 ntBASIC15.52■□□□□ 0.08
LGSNQ5TDP6 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LGSNQ5TDP6 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.52■□□□□ 0.08
LGSNQ5TDP6 C20orf181-201ENST00000623918 480 ntBASIC15.52■□□□□ 0.08
LGSNQ5TDP6 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.52■□□□□ 0.08
LGSNQ5TDP6 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.52■□□□□ 0.08
LGSNQ5TDP6 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
LGSNQ5TDP6 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
LGSNQ5TDP6 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.07
LGSNQ5TDP6 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LGSNQ5TDP6 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LGSNQ5TDP6 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LGSNQ5TDP6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LGSNQ5TDP6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.52■□□□□ 0.07
LGSNQ5TDP6 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LGSNQ5TDP6 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.52■□□□□ 0.07
LGSNQ5TDP6 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LGSNQ5TDP6 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
LGSNQ5TDP6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LGSNQ5TDP6 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LGSNQ5TDP6 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.52■□□□□ 0.07
LGSNQ5TDP6 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.52■□□□□ 0.07
LGSNQ5TDP6 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.52■□□□□ 0.07
LGSNQ5TDP6 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 AL035456.1-201ENST00000456064 1369 ntBASIC15.51■□□□□ 0.07
LGSNQ5TDP6 KRT8P12-202ENST00000472924 1397 ntBASIC15.51■□□□□ 0.07
LGSNQ5TDP6 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 MKNK2P1-201ENST00000437526 628 ntBASIC15.51■□□□□ 0.07
LGSNQ5TDP6 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 ALG1L8P-201ENST00000533887 760 ntBASIC15.51■□□□□ 0.07
LGSNQ5TDP6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LGSNQ5TDP6 AC015656.1-201ENST00000624209 3578 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms