Protein–RNA interactions for Protein: Q52LD8

RFTN2, Raftlin-2, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN2Q52LD8 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 AC138969.3-201ENST00000546612 1459 ntBASIC14.78□□□□□ -0.04
RFTN2Q52LD8 AC138932.2-201ENST00000548268 1459 ntBASIC14.78□□□□□ -0.04
RFTN2Q52LD8 AC126755.4-201ENST00000549796 1459 ntBASIC14.78□□□□□ -0.04
RFTN2Q52LD8 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 TUBB3P1-201ENST00000405796 1332 ntBASIC14.78□□□□□ -0.04
RFTN2Q52LD8 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 DNAJB3-202ENST00000449667 1266 ntBASIC14.78□□□□□ -0.04
RFTN2Q52LD8 AC004967.1-201ENST00000453589 447 ntBASIC14.78□□□□□ -0.04
RFTN2Q52LD8 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 INTS4P1-203ENST00000641008 3683 ntBASIC14.78□□□□□ -0.04
RFTN2Q52LD8 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RFTN2Q52LD8 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.77□□□□□ -0.04
RFTN2Q52LD8 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RFTN2Q52LD8 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
RFTN2Q52LD8 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
RFTN2Q52LD8 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFTN2Q52LD8 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.77□□□□□ -0.04
RFTN2Q52LD8 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
RFTN2Q52LD8 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
RFTN2Q52LD8 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RFTN2Q52LD8 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.77□□□□□ -0.04
RFTN2Q52LD8 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 TSEN15P1-201ENST00000423257 515 ntBASIC14.77□□□□□ -0.05
RFTN2Q52LD8 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 SDHAP3-202ENST00000515467 728 ntBASIC14.77□□□□□ -0.05
RFTN2Q52LD8 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 AC073592.8-201ENST00000624126 511 ntBASIC14.77□□□□□ -0.05
RFTN2Q52LD8 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RFTN2Q52LD8 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
RFTN2Q52LD8 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RFTN2Q52LD8 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RFTN2Q52LD8 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RFTN2Q52LD8 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms