Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.72■□□□□ 0.43
SHROOM1Q2M3G4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 REXO1L2P-201ENST00000425429 2069 ntBASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 AC091046.1-201ENST00000331871 207 ntBASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 CYP46A4P-201ENST00000414953 267 ntBASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 SPTLC1P5-201ENST00000450718 252 ntBASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 EIF4HP1-201ENST00000453115 687 ntBASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 RNMTL1P1-201ENST00000454103 560 ntBASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SHROOM1Q2M3G4 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SHROOM1Q2M3G4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
SHROOM1Q2M3G4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SHROOM1Q2M3G4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SHROOM1Q2M3G4 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SHROOM1Q2M3G4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.71■□□□□ 0.42
SHROOM1Q2M3G4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
SHROOM1Q2M3G4 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 RN7SKP175-201ENST00000408472 289 ntBASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 SERPINA13P-202ENST00000478994 924 ntBASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SHROOM1Q2M3G4 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.69■□□□□ 0.42
SHROOM1Q2M3G4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SHROOM1Q2M3G4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SHROOM1Q2M3G4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHROOM1Q2M3G4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SHROOM1Q2M3G4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SHROOM1Q2M3G4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHROOM1Q2M3G4 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SHROOM1Q2M3G4 RN7SKP230-201ENST00000365642 335 ntBASIC17.69■□□□□ 0.42
SHROOM1Q2M3G4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.69■□□□□ 0.42
SHROOM1Q2M3G4 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
SHROOM1Q2M3G4 AL136309.1-201ENST00000403917 691 ntBASIC17.69■□□□□ 0.42
SHROOM1Q2M3G4 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.69■□□□□ 0.42
SHROOM1Q2M3G4 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.69■□□□□ 0.42
SHROOM1Q2M3G4 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.69■□□□□ 0.42
SHROOM1Q2M3G4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHROOM1Q2M3G4 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
SHROOM1Q2M3G4 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC17.69■□□□□ 0.42
SHROOM1Q2M3G4 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHROOM1Q2M3G4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SHROOM1Q2M3G4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SHROOM1Q2M3G4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.69■□□□□ 0.42
SHROOM1Q2M3G4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms