Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.25■□□□□ 0.35
SREBF2Q12772 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
SREBF2Q12772 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC17.24■□□□□ 0.35
SREBF2Q12772 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SREBF2Q12772 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SREBF2Q12772 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SREBF2Q12772 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
SREBF2Q12772 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SREBF2Q12772 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SREBF2Q12772 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SREBF2Q12772 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SREBF2Q12772 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SREBF2Q12772 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SREBF2Q12772 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SREBF2Q12772 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.24■□□□□ 0.35
SREBF2Q12772 HIST2H2BA-201ENST00000412169 381 ntBASIC17.24■□□□□ 0.35
SREBF2Q12772 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SREBF2Q12772 TMCO5B-205ENST00000530020 894 ntBASIC17.24■□□□□ 0.35
SREBF2Q12772 POLD4-208ENST00000532830 904 ntTSL 3 BASIC17.24■□□□□ 0.35
SREBF2Q12772 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.24■□□□□ 0.35
SREBF2Q12772 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SREBF2Q12772 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.24■□□□□ 0.35
SREBF2Q12772 AC007326.1-201ENST00000604539 458 ntBASIC17.24■□□□□ 0.35
SREBF2Q12772 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
SREBF2Q12772 AC005618.3-201ENST00000624928 458 ntBASIC17.24■□□□□ 0.35
SREBF2Q12772 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SREBF2Q12772 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SREBF2Q12772 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SREBF2Q12772 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SREBF2Q12772 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
SREBF2Q12772 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC17.24■□□□□ 0.35
SREBF2Q12772 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.24■□□□□ 0.35
SREBF2Q12772 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SREBF2Q12772 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SREBF2Q12772 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.24■□□□□ 0.35
SREBF2Q12772 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SREBF2Q12772 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.24■□□□□ 0.35
SREBF2Q12772 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.24■□□□□ 0.35
SREBF2Q12772 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SREBF2Q12772 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SREBF2Q12772 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SREBF2Q12772 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
SREBF2Q12772 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.23■□□□□ 0.35
SREBF2Q12772 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SREBF2Q12772 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SREBF2Q12772 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SREBF2Q12772 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.23■□□□□ 0.35
SREBF2Q12772 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SREBF2Q12772 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SREBF2Q12772 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SREBF2Q12772 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SREBF2Q12772 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SREBF2Q12772 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SREBF2Q12772 AL157414.3-201ENST00000624276 1954 ntBASIC17.23■□□□□ 0.35
SREBF2Q12772 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.23■□□□□ 0.35
SREBF2Q12772 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SREBF2Q12772 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SREBF2Q12772 BANF1P3-201ENST00000412556 261 ntBASIC17.23■□□□□ 0.35
SREBF2Q12772 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC17.23■□□□□ 0.35
SREBF2Q12772 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.23■□□□□ 0.35
SREBF2Q12772 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC17.23■□□□□ 0.35
SREBF2Q12772 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC17.23■□□□□ 0.35
SREBF2Q12772 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC17.23■□□□□ 0.35
SREBF2Q12772 RPSAP15-201ENST00000448168 861 ntBASIC17.23■□□□□ 0.35
SREBF2Q12772 AC024293.1-201ENST00000467930 498 ntBASIC17.23■□□□□ 0.35
SREBF2Q12772 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.23■□□□□ 0.35
SREBF2Q12772 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC17.23■□□□□ 0.35
SREBF2Q12772 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC17.23■□□□□ 0.35
SREBF2Q12772 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC17.23■□□□□ 0.35
SREBF2Q12772 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC17.23■□□□□ 0.35
SREBF2Q12772 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.23■□□□□ 0.35
SREBF2Q12772 ETV2-207ENST00000619399 994 ntTSL 5 BASIC17.23■□□□□ 0.35
SREBF2Q12772 AC025262.2-201ENST00000623975 1056 ntBASIC17.23■□□□□ 0.35
SREBF2Q12772 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC17.23■□□□□ 0.35
SREBF2Q12772 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
SREBF2Q12772 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SREBF2Q12772 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SREBF2Q12772 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.23■□□□□ 0.35
SREBF2Q12772 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SREBF2Q12772 AC144522.1-201ENST00000625111 1658 ntBASIC17.23■□□□□ 0.35
SREBF2Q12772 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SREBF2Q12772 AL138725.1-201ENST00000407347 1314 ntBASIC17.22■□□□□ 0.35
SREBF2Q12772 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SREBF2Q12772 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SREBF2Q12772 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SREBF2Q12772 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SREBF2Q12772 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SREBF2Q12772 AC026471.1-201ENST00000564629 3026 ntBASIC17.22■□□□□ 0.35
SREBF2Q12772 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SREBF2Q12772 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SREBF2Q12772 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SREBF2Q12772 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SREBF2Q12772 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SREBF2Q12772 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SREBF2Q12772 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC17.22■□□□□ 0.35
SREBF2Q12772 AL157407.1-201ENST00000435784 904 ntBASIC17.22■□□□□ 0.35
SREBF2Q12772 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC17.22■□□□□ 0.35
SREBF2Q12772 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SREBF2Q12772 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SREBF2Q12772 DNM1P51-201ENST00000558149 522 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms