Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-1P78426 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
NKX6-1P78426 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-1P78426 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-1P78426 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.62□□□□□ -0.23
NKX6-1P78426 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
NKX6-1P78426 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-1P78426 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.62□□□□□ -0.23
NKX6-1P78426 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.62□□□□□ -0.23
NKX6-1P78426 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.62□□□□□ -0.23
NKX6-1P78426 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-1P78426 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.62□□□□□ -0.23
NKX6-1P78426 MYO15B-237ENST00000642007 4893 ntBASIC13.62□□□□□ -0.23
NKX6-1P78426 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
NKX6-1P78426 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.62□□□□□ -0.23
NKX6-1P78426 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NKX6-1P78426 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-1P78426 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-1P78426 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-1P78426 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-1P78426 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-1P78426 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-1P78426 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
NKX6-1P78426 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.61□□□□□ -0.23
NKX6-1P78426 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-1P78426 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.61□□□□□ -0.23
NKX6-1P78426 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-1P78426 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-1P78426 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
NKX6-1P78426 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-1P78426 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
NKX6-1P78426 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.61□□□□□ -0.23
NKX6-1P78426 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-1P78426 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.61□□□□□ -0.23
NKX6-1P78426 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.61□□□□□ -0.23
NKX6-1P78426 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-1P78426 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.61□□□□□ -0.23
NKX6-1P78426 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.61□□□□□ -0.23
NKX6-1P78426 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.61□□□□□ -0.23
NKX6-1P78426 PARP8-218ENST00000513738 596 ntTSL 4 BASIC13.61□□□□□ -0.23
NKX6-1P78426 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.61□□□□□ -0.23
NKX6-1P78426 AL583810.1-201ENST00000553344 1045 ntBASIC13.61□□□□□ -0.23
NKX6-1P78426 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.61□□□□□ -0.23
NKX6-1P78426 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.61□□□□□ -0.23
NKX6-1P78426 AC233724.13-201ENST00000598383 410 ntBASIC13.61□□□□□ -0.23
NKX6-1P78426 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.61□□□□□ -0.23
NKX6-1P78426 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.61□□□□□ -0.23
NKX6-1P78426 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-1P78426 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.61□□□□□ -0.23
NKX6-1P78426 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-1P78426 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-1P78426 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-1P78426 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.61□□□□□ -0.23
NKX6-1P78426 AL607033.1-201ENST00000623900 1599 ntBASIC13.61□□□□□ -0.23
NKX6-1P78426 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-1P78426 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.61□□□□□ -0.23
NKX6-1P78426 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.61□□□□□ -0.23
NKX6-1P78426 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.61□□□□□ -0.23
NKX6-1P78426 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
NKX6-1P78426 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
NKX6-1P78426 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-1P78426 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-1P78426 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX6-1P78426 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.61□□□□□ -0.23
NKX6-1P78426 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.61□□□□□ -0.23
NKX6-1P78426 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.61□□□□□ -0.23
NKX6-1P78426 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-1P78426 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX6-1P78426 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-1P78426 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX6-1P78426 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX6-1P78426 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-1P78426 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-1P78426 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
NKX6-1P78426 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
NKX6-1P78426 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.6□□□□□ -0.23
NKX6-1P78426 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
NKX6-1P78426 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-1P78426 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-1P78426 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
NKX6-1P78426 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-1P78426 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX6-1P78426 AC087386.2-201ENST00000623212 4637 ntBASIC13.6□□□□□ -0.23
NKX6-1P78426 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX6-1P78426 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-1P78426 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
NKX6-1P78426 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-1P78426 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-1P78426 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-1P78426 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
NKX6-1P78426 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-1P78426 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-1P78426 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-1P78426 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-1P78426 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-1P78426 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX6-1P78426 AC092933.1-201ENST00000393644 945 ntBASIC13.6□□□□□ -0.23
NKX6-1P78426 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.6□□□□□ -0.23
NKX6-1P78426 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.6□□□□□ -0.23
NKX6-1P78426 TOMM22P5-201ENST00000416399 439 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms