Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
RAE1P78406 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.52□□□□□ -0.09
RAE1P78406 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.52□□□□□ -0.09
RAE1P78406 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
RAE1P78406 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.52□□□□□ -0.09
RAE1P78406 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.52□□□□□ -0.09
RAE1P78406 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.52□□□□□ -0.09
RAE1P78406 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAE1P78406 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAE1P78406 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAE1P78406 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.52□□□□□ -0.09
RAE1P78406 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAE1P78406 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.52□□□□□ -0.09
RAE1P78406 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAE1P78406 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
RAE1P78406 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.52□□□□□ -0.09
RAE1P78406 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.52□□□□□ -0.09
RAE1P78406 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAE1P78406 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.52□□□□□ -0.09
RAE1P78406 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAE1P78406 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
RAE1P78406 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
RAE1P78406 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAE1P78406 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAE1P78406 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAE1P78406 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RAE1P78406 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RAE1P78406 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RAE1P78406 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAE1P78406 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAE1P78406 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAE1P78406 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
RAE1P78406 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAE1P78406 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAE1P78406 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.51□□□□□ -0.09
RAE1P78406 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RAE1P78406 AL137783.1-201ENST00000623494 1896 ntBASIC14.51□□□□□ -0.09
RAE1P78406 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
RAE1P78406 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAE1P78406 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAE1P78406 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAE1P78406 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.51□□□□□ -0.09
RAE1P78406 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.51□□□□□ -0.09
RAE1P78406 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAE1P78406 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAE1P78406 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAE1P78406 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAE1P78406 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.51□□□□□ -0.09
RAE1P78406 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.51□□□□□ -0.09
RAE1P78406 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.51□□□□□ -0.09
RAE1P78406 MEP1AP4-201ENST00000423244 1087 ntBASIC14.51□□□□□ -0.09
RAE1P78406 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAE1P78406 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC14.51□□□□□ -0.09
RAE1P78406 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.51□□□□□ -0.09
RAE1P78406 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAE1P78406 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAE1P78406 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
RAE1P78406 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAE1P78406 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.51□□□□□ -0.09
RAE1P78406 AC099568.2-201ENST00000609194 695 ntBASIC14.51□□□□□ -0.09
RAE1P78406 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAE1P78406 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RAE1P78406 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.51□□□□□ -0.09
RAE1P78406 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RAE1P78406 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAE1P78406 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.51□□□□□ -0.09
RAE1P78406 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAE1P78406 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAE1P78406 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.51□□□□□ -0.09
RAE1P78406 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.51□□□□□ -0.09
RAE1P78406 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAE1P78406 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAE1P78406 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.5□□□□□ -0.09
RAE1P78406 SNX18-202ENST00000343017 3140 ntBASIC14.5□□□□□ -0.09
RAE1P78406 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAE1P78406 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.5□□□□□ -0.09
RAE1P78406 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
RAE1P78406 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAE1P78406 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RAE1P78406 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAE1P78406 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.5□□□□□ -0.09
RAE1P78406 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RAE1P78406 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.5□□□□□ -0.09
RAE1P78406 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RAE1P78406 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.5□□□□□ -0.09
RAE1P78406 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.5□□□□□ -0.09
RAE1P78406 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.5□□□□□ -0.09
RAE1P78406 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.5□□□□□ -0.09
RAE1P78406 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RAE1P78406 INGX-202ENST00000489074 768 ntBASIC14.5□□□□□ -0.09
RAE1P78406 AC093004.1-201ENST00000508850 424 ntBASIC14.5□□□□□ -0.09
RAE1P78406 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.5□□□□□ -0.09
RAE1P78406 SERBP1P5-201ENST00000510079 1181 ntBASIC14.5□□□□□ -0.09
RAE1P78406 RNA5SP421-201ENST00000516864 134 ntBASIC14.5□□□□□ -0.09
RAE1P78406 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.5□□□□□ -0.09
RAE1P78406 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.5□□□□□ -0.09
RAE1P78406 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.5□□□□□ -0.09
RAE1P78406 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.5□□□□□ -0.09
RAE1P78406 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.5□□□□□ -0.09
RAE1P78406 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms