Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
CCNA1P78396 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCNA1P78396 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC17.28■□□□□ 0.36
CCNA1P78396 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.28■□□□□ 0.36
CCNA1P78396 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.28■□□□□ 0.36
CCNA1P78396 AC005324.6-201ENST00000587972 613 ntBASIC17.28■□□□□ 0.36
CCNA1P78396 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CCNA1P78396 MIR6727-201ENST00000620702 65 ntBASIC17.28■□□□□ 0.36
CCNA1P78396 SNX1-214ENST00000625244 324 ntTSL 5 BASIC17.28■□□□□ 0.36
CCNA1P78396 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.28■□□□□ 0.36
CCNA1P78396 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCNA1P78396 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCNA1P78396 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.28■□□□□ 0.36
CCNA1P78396 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCNA1P78396 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCNA1P78396 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCNA1P78396 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CCNA1P78396 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCNA1P78396 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCNA1P78396 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCNA1P78396 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCNA1P78396 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCNA1P78396 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CCNA1P78396 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCNA1P78396 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.27■□□□□ 0.36
CCNA1P78396 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCNA1P78396 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCNA1P78396 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCNA1P78396 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
CCNA1P78396 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CCNA1P78396 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCNA1P78396 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCNA1P78396 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.27■□□□□ 0.36
CCNA1P78396 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCNA1P78396 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCNA1P78396 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.27■□□□□ 0.36
CCNA1P78396 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCNA1P78396 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.27■□□□□ 0.36
CCNA1P78396 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCNA1P78396 AC006335.1-201ENST00000445200 547 ntBASIC17.27■□□□□ 0.36
CCNA1P78396 RPS2P36-201ENST00000456516 831 ntBASIC17.27■□□□□ 0.36
CCNA1P78396 AC012618.1-201ENST00000461223 412 ntBASIC17.27■□□□□ 0.36
CCNA1P78396 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.27■□□□□ 0.36
CCNA1P78396 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.27■□□□□ 0.36
CCNA1P78396 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCNA1P78396 RN7SL574P-201ENST00000581512 297 ntBASIC17.27■□□□□ 0.36
CCNA1P78396 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.27■□□□□ 0.36
CCNA1P78396 AC079336.7-201ENST00000623428 1078 ntBASIC17.27■□□□□ 0.36
CCNA1P78396 AC068587.8-201ENST00000641239 219 ntBASIC17.27■□□□□ 0.36
CCNA1P78396 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.27■□□□□ 0.36
CCNA1P78396 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCNA1P78396 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.27■□□□□ 0.36
CCNA1P78396 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CCNA1P78396 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCNA1P78396 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCNA1P78396 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCNA1P78396 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCNA1P78396 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
CCNA1P78396 AL157791.1-201ENST00000553667 1699 ntBASIC17.26■□□□□ 0.35
CCNA1P78396 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCNA1P78396 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCNA1P78396 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCNA1P78396 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
CCNA1P78396 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCNA1P78396 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCNA1P78396 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.26■□□□□ 0.35
CCNA1P78396 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCNA1P78396 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CCNA1P78396 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCNA1P78396 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCNA1P78396 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.26■□□□□ 0.35
CCNA1P78396 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCNA1P78396 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCNA1P78396 ACTG1P2-201ENST00000415776 1125 ntBASIC17.26■□□□□ 0.35
CCNA1P78396 ACTG1P11-201ENST00000425411 1125 ntBASIC17.26■□□□□ 0.35
CCNA1P78396 PUDPP3-201ENST00000445368 636 ntBASIC17.26■□□□□ 0.35
CCNA1P78396 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.26■□□□□ 0.35
CCNA1P78396 AC125604.1-201ENST00000496255 707 ntBASIC17.26■□□□□ 0.35
CCNA1P78396 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.26■□□□□ 0.35
CCNA1P78396 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC17.26■□□□□ 0.35
CCNA1P78396 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CCNA1P78396 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCNA1P78396 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC17.26■□□□□ 0.35
CCNA1P78396 AC009955.4-201ENST00000597192 544 ntBASIC17.26■□□□□ 0.35
CCNA1P78396 AC090164.2-201ENST00000611487 516 ntBASIC17.26■□□□□ 0.35
CCNA1P78396 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CCNA1P78396 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCNA1P78396 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CCNA1P78396 SHC1P1-201ENST00000425230 1745 ntBASIC17.26■□□□□ 0.35
CCNA1P78396 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCNA1P78396 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCNA1P78396 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCNA1P78396 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCNA1P78396 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCNA1P78396 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CCNA1P78396 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCNA1P78396 AC024909.3-201ENST00000611513 2257 ntBASIC17.26■□□□□ 0.35
CCNA1P78396 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCNA1P78396 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CCNA1P78396 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms