Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CXCR4P61073 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CXCR4P61073 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCR4P61073 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCR4P61073 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCR4P61073 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.01□□□□□ -0.17
CXCR4P61073 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCR4P61073 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCR4P61073 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CXCR4P61073 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCR4P61073 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CXCR4P61073 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCR4P61073 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCR4P61073 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCR4P61073 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCR4P61073 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCR4P61073 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCR4P61073 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CXCR4P61073 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CXCR4P61073 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.01□□□□□ -0.17
CXCR4P61073 FAM220BP-201ENST00000377689 816 ntBASIC14.01□□□□□ -0.17
CXCR4P61073 TFAMP1-201ENST00000412727 736 ntBASIC14.01□□□□□ -0.17
CXCR4P61073 AL355306.1-201ENST00000415580 579 ntBASIC14.01□□□□□ -0.17
CXCR4P61073 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CXCR4P61073 AL671277.1-201ENST00000429656 993 ntBASIC14.01□□□□□ -0.17
CXCR4P61073 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.01□□□□□ -0.17
CXCR4P61073 TMEM198B-204ENST00000484016 896 ntBASIC14.01□□□□□ -0.17
CXCR4P61073 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.01□□□□□ -0.17
CXCR4P61073 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.01□□□□□ -0.17
CXCR4P61073 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.01□□□□□ -0.17
CXCR4P61073 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.01□□□□□ -0.17
CXCR4P61073 AC092865.6-201ENST00000642101 219 ntBASIC14.01□□□□□ -0.17
CXCR4P61073 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.01□□□□□ -0.17
CXCR4P61073 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
CXCR4P61073 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.01□□□□□ -0.17
CXCR4P61073 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCR4P61073 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCR4P61073 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCR4P61073 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CXCR4P61073 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CXCR4P61073 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.01□□□□□ -0.17
CXCR4P61073 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.01□□□□□ -0.17
CXCR4P61073 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CXCR4P61073 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CXCR4P61073 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCR4P61073 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCR4P61073 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCR4P61073 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCR4P61073 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCR4P61073 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CXCR4P61073 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CXCR4P61073 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14□□□□□ -0.17
CXCR4P61073 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CXCR4P61073 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CXCR4P61073 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CXCR4P61073 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CXCR4P61073 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14□□□□□ -0.17
CXCR4P61073 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14□□□□□ -0.17
CXCR4P61073 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CXCR4P61073 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14□□□□□ -0.17
CXCR4P61073 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CXCR4P61073 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14□□□□□ -0.17
CXCR4P61073 AC107918.4-201ENST00000641966 3141 ntBASIC14□□□□□ -0.17
CXCR4P61073 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14□□□□□ -0.17
CXCR4P61073 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CXCR4P61073 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CXCR4P61073 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CXCR4P61073 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CXCR4P61073 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14□□□□□ -0.17
CXCR4P61073 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14□□□□□ -0.17
CXCR4P61073 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
CXCR4P61073 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CXCR4P61073 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14□□□□□ -0.17
CXCR4P61073 AC104457.1-201ENST00000401024 814 ntBASIC14□□□□□ -0.17
CXCR4P61073 HNRNPA1P28-201ENST00000424481 961 ntBASIC14□□□□□ -0.17
CXCR4P61073 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14□□□□□ -0.17
CXCR4P61073 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14□□□□□ -0.17
CXCR4P61073 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14□□□□□ -0.17
CXCR4P61073 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14□□□□□ -0.17
CXCR4P61073 RNA5SP416-201ENST00000516838 111 ntBASIC14□□□□□ -0.17
CXCR4P61073 KRT126P-201ENST00000549467 1181 ntBASIC14□□□□□ -0.17
CXCR4P61073 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14□□□□□ -0.17
CXCR4P61073 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CXCR4P61073 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14□□□□□ -0.17
CXCR4P61073 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14□□□□□ -0.17
CXCR4P61073 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14□□□□□ -0.17
CXCR4P61073 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14□□□□□ -0.17
CXCR4P61073 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14□□□□□ -0.17
CXCR4P61073 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CXCR4P61073 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CXCR4P61073 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14□□□□□ -0.17
CXCR4P61073 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14□□□□□ -0.17
CXCR4P61073 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CXCR4P61073 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CXCR4P61073 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14□□□□□ -0.17
CXCR4P61073 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14□□□□□ -0.17
CXCR4P61073 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14□□□□□ -0.17
CXCR4P61073 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CXCR4P61073 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CXCR4P61073 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms