Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC10.87□□□□□ -0.67
CKS1BP61024 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CKS1BP61024 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC10.87□□□□□ -0.67
CKS1BP61024 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CKS1BP61024 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
CKS1BP61024 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CKS1BP61024 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC10.87□□□□□ -0.67
CKS1BP61024 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC10.87□□□□□ -0.67
CKS1BP61024 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
CKS1BP61024 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC10.87□□□□□ -0.67
CKS1BP61024 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
CKS1BP61024 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CKS1BP61024 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CKS1BP61024 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CKS1BP61024 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CKS1BP61024 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CKS1BP61024 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CKS1BP61024 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC10.87□□□□□ -0.67
CKS1BP61024 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC10.87□□□□□ -0.67
CKS1BP61024 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC10.87□□□□□ -0.67
CKS1BP61024 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC10.87□□□□□ -0.67
CKS1BP61024 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC10.87□□□□□ -0.67
CKS1BP61024 HAUS4P1-201ENST00000406739 1145 ntBASIC10.87□□□□□ -0.67
CKS1BP61024 COPS8-203ENST00000409334 794 ntTSL 5 BASIC10.87□□□□□ -0.67
CKS1BP61024 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC10.87□□□□□ -0.67
CKS1BP61024 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CKS1BP61024 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
CKS1BP61024 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC10.87□□□□□ -0.67
CKS1BP61024 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
CKS1BP61024 AC091304.2-201ENST00000564639 760 ntBASIC10.87□□□□□ -0.67
CKS1BP61024 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC10.87□□□□□ -0.67
CKS1BP61024 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC10.87□□□□□ -0.67
CKS1BP61024 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC10.87□□□□□ -0.67
CKS1BP61024 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CKS1BP61024 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
CKS1BP61024 GSN-209ENST00000449733 2702 ntTSL 2 BASIC10.87□□□□□ -0.67
CKS1BP61024 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC10.87□□□□□ -0.67
CKS1BP61024 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CKS1BP61024 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC10.87□□□□□ -0.67
CKS1BP61024 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CKS1BP61024 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
CKS1BP61024 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC10.87□□□□□ -0.67
CKS1BP61024 AC012313.8-201ENST00000595059 5402 ntBASIC10.87□□□□□ -0.67
CKS1BP61024 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
CKS1BP61024 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
CKS1BP61024 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CKS1BP61024 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CKS1BP61024 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
CKS1BP61024 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
CKS1BP61024 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CKS1BP61024 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC10.87□□□□□ -0.67
CKS1BP61024 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC10.87□□□□□ -0.67
CKS1BP61024 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC10.87□□□□□ -0.67
CKS1BP61024 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
CKS1BP61024 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CKS1BP61024 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC10.86□□□□□ -0.67
CKS1BP61024 AC140479.7-201ENST00000636301 2332 ntBASIC10.86□□□□□ -0.67
CKS1BP61024 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC10.86□□□□□ -0.67
CKS1BP61024 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS1BP61024 PCDHB17P-202ENST00000623466 3066 ntBASIC10.86□□□□□ -0.67
CKS1BP61024 USP28-214ENST00000545540 3431 ntTSL 2 BASIC10.86□□□□□ -0.67
CKS1BP61024 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS1BP61024 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS1BP61024 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC10.86□□□□□ -0.67
CKS1BP61024 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS1BP61024 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
CKS1BP61024 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
CKS1BP61024 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC10.86□□□□□ -0.67
CKS1BP61024 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CKS1BP61024 AC027020.2-201ENST00000602585 2389 ntBASIC10.86□□□□□ -0.67
CKS1BP61024 CD99-202ENST00000381180 530 ntTSL 2 BASIC10.86□□□□□ -0.67
CKS1BP61024 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC10.86□□□□□ -0.67
CKS1BP61024 LSM5-204ENST00000409909 740 ntTSL 2 BASIC10.86□□□□□ -0.67
CKS1BP61024 FGFR3P6-201ENST00000457012 610 ntBASIC10.86□□□□□ -0.67
CKS1BP61024 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC10.86□□□□□ -0.67
CKS1BP61024 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC10.86□□□□□ -0.67
CKS1BP61024 AC136632.2-201ENST00000512891 861 ntBASIC10.86□□□□□ -0.67
CKS1BP61024 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC10.86□□□□□ -0.67
CKS1BP61024 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC10.86□□□□□ -0.67
CKS1BP61024 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC10.86□□□□□ -0.67
CKS1BP61024 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC10.86□□□□□ -0.67
CKS1BP61024 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC10.86□□□□□ -0.67
CKS1BP61024 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CKS1BP61024 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC10.86□□□□□ -0.67
CKS1BP61024 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC10.86□□□□□ -0.67
CKS1BP61024 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC10.86□□□□□ -0.67
CKS1BP61024 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
CKS1BP61024 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS1BP61024 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS1BP61024 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS1BP61024 AC092919.2-201ENST00000623631 1645 ntBASIC10.86□□□□□ -0.67
CKS1BP61024 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS1BP61024 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC10.86□□□□□ -0.67
CKS1BP61024 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC10.86□□□□□ -0.67
CKS1BP61024 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS1BP61024 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS1BP61024 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
CKS1BP61024 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CKS1BP61024 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC10.86□□□□□ -0.67
CKS1BP61024 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms