Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
CLDN20P56880 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.12□□□□□ -0.15
CLDN20P56880 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.12□□□□□ -0.15
CLDN20P56880 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN20P56880 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN20P56880 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDN20P56880 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN20P56880 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN20P56880 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN20P56880 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN20P56880 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN20P56880 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN20P56880 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN20P56880 AC138969.3-201ENST00000546612 1459 ntBASIC14.12□□□□□ -0.15
CLDN20P56880 AC138932.2-201ENST00000548268 1459 ntBASIC14.12□□□□□ -0.15
CLDN20P56880 AC126755.4-201ENST00000549796 1459 ntBASIC14.12□□□□□ -0.15
CLDN20P56880 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CLDN20P56880 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.12□□□□□ -0.15
CLDN20P56880 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN20P56880 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CLDN20P56880 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.11□□□□□ -0.15
CLDN20P56880 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.11□□□□□ -0.15
CLDN20P56880 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN20P56880 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN20P56880 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.11□□□□□ -0.15
CLDN20P56880 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CLDN20P56880 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN20P56880 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.11□□□□□ -0.15
CLDN20P56880 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.11□□□□□ -0.15
CLDN20P56880 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.11□□□□□ -0.15
CLDN20P56880 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.11□□□□□ -0.15
CLDN20P56880 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CLDN20P56880 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN20P56880 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN20P56880 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN20P56880 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.11□□□□□ -0.15
CLDN20P56880 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CLDN20P56880 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.11□□□□□ -0.15
CLDN20P56880 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN20P56880 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.11□□□□□ -0.15
CLDN20P56880 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
CLDN20P56880 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.11□□□□□ -0.15
CLDN20P56880 WASH4P-201ENST00000564273 1246 ntBASIC14.11□□□□□ -0.15
CLDN20P56880 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN20P56880 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.11□□□□□ -0.15
CLDN20P56880 AC027307.3-201ENST00000594262 1100 ntBASIC14.11□□□□□ -0.15
CLDN20P56880 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.11□□□□□ -0.15
CLDN20P56880 AC093726.1-201ENST00000608064 963 ntBASIC14.11□□□□□ -0.15
CLDN20P56880 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.11□□□□□ -0.15
CLDN20P56880 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN20P56880 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CLDN20P56880 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.11□□□□□ -0.15
CLDN20P56880 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN20P56880 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN20P56880 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
CLDN20P56880 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CLDN20P56880 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN20P56880 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.11□□□□□ -0.15
CLDN20P56880 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.11□□□□□ -0.15
CLDN20P56880 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN20P56880 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.11□□□□□ -0.15
CLDN20P56880 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN20P56880 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN20P56880 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDN20P56880 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN20P56880 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN20P56880 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.1□□□□□ -0.15
CLDN20P56880 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN20P56880 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN20P56880 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.1□□□□□ -0.15
CLDN20P56880 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.1□□□□□ -0.15
CLDN20P56880 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN20P56880 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN20P56880 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN20P56880 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.1□□□□□ -0.15
CLDN20P56880 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.1□□□□□ -0.15
CLDN20P56880 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.1□□□□□ -0.15
CLDN20P56880 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN20P56880 DGCR5-201ENST00000399539 862 ntBASIC14.1□□□□□ -0.15
CLDN20P56880 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.1□□□□□ -0.15
CLDN20P56880 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CLDN20P56880 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.1□□□□□ -0.15
CLDN20P56880 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN20P56880 MYCLP2-201ENST00000449268 967 ntBASIC14.1□□□□□ -0.15
CLDN20P56880 RN7SL399P-201ENST00000471648 279 ntBASIC14.1□□□□□ -0.15
CLDN20P56880 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.1□□□□□ -0.15
CLDN20P56880 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.1□□□□□ -0.15
CLDN20P56880 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.1□□□□□ -0.15
CLDN20P56880 RRP7BP-205ENST00000566851 833 ntBASIC14.1□□□□□ -0.15
CLDN20P56880 AC036164.1-201ENST00000570544 333 ntBASIC14.1□□□□□ -0.15
CLDN20P56880 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.1□□□□□ -0.15
CLDN20P56880 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CLDN20P56880 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN20P56880 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN20P56880 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.1□□□□□ -0.15
CLDN20P56880 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN20P56880 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDN20P56880 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CLDN20P56880 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.1□□□□□ -0.15
CLDN20P56880 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms