Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.85□□□□□ -0.19
SUMO3P55854 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.85□□□□□ -0.19
SUMO3P55854 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.85□□□□□ -0.19
SUMO3P55854 AC007389.4-201ENST00000454674 793 ntBASIC13.85□□□□□ -0.19
SUMO3P55854 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.85□□□□□ -0.19
SUMO3P55854 GIMAP3P-201ENST00000495150 836 ntBASIC13.85□□□□□ -0.19
SUMO3P55854 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.85□□□□□ -0.19
SUMO3P55854 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.85□□□□□ -0.19
SUMO3P55854 AL596325.1-201ENST00000563991 1082 ntBASIC13.85□□□□□ -0.19
SUMO3P55854 MIR5189-201ENST00000577370 114 ntBASIC13.85□□□□□ -0.19
SUMO3P55854 AC015936.2-201ENST00000593177 259 ntBASIC13.85□□□□□ -0.19
SUMO3P55854 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SUMO3P55854 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SUMO3P55854 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SUMO3P55854 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.85□□□□□ -0.19
SUMO3P55854 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SUMO3P55854 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.85□□□□□ -0.19
SUMO3P55854 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SUMO3P55854 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SUMO3P55854 KRT8P35-201ENST00000483942 1338 ntBASIC13.85□□□□□ -0.19
SUMO3P55854 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.85□□□□□ -0.19
SUMO3P55854 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SUMO3P55854 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SUMO3P55854 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.85□□□□□ -0.19
SUMO3P55854 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SUMO3P55854 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
SUMO3P55854 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.85□□□□□ -0.19
SUMO3P55854 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SUMO3P55854 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.85□□□□□ -0.19
SUMO3P55854 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SUMO3P55854 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SUMO3P55854 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
SUMO3P55854 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SUMO3P55854 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.84□□□□□ -0.19
SUMO3P55854 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.84□□□□□ -0.19
SUMO3P55854 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.84□□□□□ -0.19
SUMO3P55854 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SUMO3P55854 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
SUMO3P55854 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.84□□□□□ -0.19
SUMO3P55854 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.84□□□□□ -0.19
SUMO3P55854 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.84□□□□□ -0.19
SUMO3P55854 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SUMO3P55854 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SUMO3P55854 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SUMO3P55854 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.84□□□□□ -0.19
SUMO3P55854 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SUMO3P55854 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.84□□□□□ -0.19
SUMO3P55854 AC012441.1-201ENST00000446669 685 ntBASIC13.84□□□□□ -0.19
SUMO3P55854 AC093433.1-201ENST00000458048 571 ntBASIC13.84□□□□□ -0.19
SUMO3P55854 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.84□□□□□ -0.19
SUMO3P55854 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.84□□□□□ -0.19
SUMO3P55854 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SUMO3P55854 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.84□□□□□ -0.19
SUMO3P55854 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.84□□□□□ -0.19
SUMO3P55854 DUX4L47-201ENST00000566374 394 ntBASIC13.84□□□□□ -0.19
SUMO3P55854 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 AC010319.3-201ENST00000597028 470 ntBASIC13.84□□□□□ -0.19
SUMO3P55854 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.84□□□□□ -0.19
SUMO3P55854 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SUMO3P55854 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.84□□□□□ -0.19
SUMO3P55854 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC13.84□□□□□ -0.19
SUMO3P55854 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SUMO3P55854 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
SUMO3P55854 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SUMO3P55854 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 LRRC59-203ENST00000576448 1531 ntBASIC13.84□□□□□ -0.19
SUMO3P55854 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SUMO3P55854 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
SUMO3P55854 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SUMO3P55854 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.84□□□□□ -0.19
SUMO3P55854 TSPY26P-202ENST00000565928 3884 ntBASIC13.84□□□□□ -0.19
SUMO3P55854 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SUMO3P55854 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.83□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms