Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH11P55287 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH11P55287 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH11P55287 CYP4F24P-201ENST00000586049 1580 ntBASIC14.13□□□□□ -0.15
CDH11P55287 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.13□□□□□ -0.15
CDH11P55287 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CDH11P55287 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.13□□□□□ -0.15
CDH11P55287 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
CDH11P55287 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH11P55287 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.13□□□□□ -0.15
CDH11P55287 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH11P55287 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH11P55287 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH11P55287 FAM220BP-201ENST00000377689 816 ntBASIC14.13□□□□□ -0.15
CDH11P55287 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDH11P55287 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.13□□□□□ -0.15
CDH11P55287 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CDH11P55287 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.13□□□□□ -0.15
CDH11P55287 AC027369.6-201ENST00000525520 931 ntBASIC14.13□□□□□ -0.15
CDH11P55287 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.13□□□□□ -0.15
CDH11P55287 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.13□□□□□ -0.15
CDH11P55287 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.13□□□□□ -0.15
CDH11P55287 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
CDH11P55287 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.13□□□□□ -0.15
CDH11P55287 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
CDH11P55287 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDH11P55287 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.13□□□□□ -0.15
CDH11P55287 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
CDH11P55287 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH11P55287 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CDH11P55287 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CDH11P55287 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.13□□□□□ -0.15
CDH11P55287 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
CDH11P55287 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.12□□□□□ -0.15
CDH11P55287 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CDH11P55287 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
CDH11P55287 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CDH11P55287 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.12□□□□□ -0.15
CDH11P55287 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.12□□□□□ -0.15
CDH11P55287 WASH3P-207ENST00000560956 1394 ntBASIC14.12□□□□□ -0.15
CDH11P55287 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CDH11P55287 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CDH11P55287 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH11P55287 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH11P55287 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 AC092580.3-201ENST00000430932 139 ntBASIC14.12□□□□□ -0.15
CDH11P55287 AC241585.1-201ENST00000433527 519 ntBASIC14.12□□□□□ -0.15
CDH11P55287 MTND6P24-201ENST00000440466 518 ntBASIC14.12□□□□□ -0.15
CDH11P55287 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH11P55287 TSPY16P-201ENST00000449843 468 ntBASIC14.12□□□□□ -0.15
CDH11P55287 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH11P55287 AL139010.1-201ENST00000454878 894 ntBASIC14.12□□□□□ -0.15
CDH11P55287 TERF1P3-201ENST00000505638 1227 ntBASIC14.12□□□□□ -0.15
CDH11P55287 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.12□□□□□ -0.15
CDH11P55287 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.12□□□□□ -0.15
CDH11P55287 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.12□□□□□ -0.15
CDH11P55287 HNRNPUP1-201ENST00000554987 333 ntBASIC14.12□□□□□ -0.15
CDH11P55287 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.12□□□□□ -0.15
CDH11P55287 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH11P55287 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH11P55287 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.12□□□□□ -0.15
CDH11P55287 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CDH11P55287 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.12□□□□□ -0.15
CDH11P55287 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.12□□□□□ -0.15
CDH11P55287 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.12□□□□□ -0.15
CDH11P55287 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH11P55287 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CDH11P55287 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH11P55287 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CDH11P55287 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.12□□□□□ -0.15
CDH11P55287 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDH11P55287 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms