Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2DP55273 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.15■□□□□ 0.02
CDKN2DP55273 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CDKN2DP55273 SNX18-202ENST00000343017 3140 ntBASIC15.15■□□□□ 0.02
CDKN2DP55273 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.15■□□□□ 0.02
CDKN2DP55273 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CDKN2DP55273 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CDKN2DP55273 AC005912.2-201ENST00000619492 2400 ntBASIC15.15■□□□□ 0.02
CDKN2DP55273 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2DP55273 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CDKN2DP55273 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CDKN2DP55273 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2DP55273 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.15■□□□□ 0.02
CDKN2DP55273 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
CDKN2DP55273 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CDKN2DP55273 AC007191.1-201ENST00000623179 2995 ntBASIC15.15■□□□□ 0.02
CDKN2DP55273 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2DP55273 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.14■□□□□ 0.01
CDKN2DP55273 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKN2DP55273 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2DP55273 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2DP55273 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.14■□□□□ 0.01
CDKN2DP55273 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2DP55273 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2DP55273 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2DP55273 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CDKN2DP55273 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.14■□□□□ 0.01
CDKN2DP55273 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2DP55273 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKN2DP55273 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.14■□□□□ 0.01
CDKN2DP55273 PMS2P2-201ENST00000425039 1128 ntBASIC15.14■□□□□ 0.01
CDKN2DP55273 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.14■□□□□ 0.01
CDKN2DP55273 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.14■□□□□ 0.01
CDKN2DP55273 RN7SL399P-201ENST00000471648 279 ntBASIC15.14■□□□□ 0.01
CDKN2DP55273 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKN2DP55273 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
CDKN2DP55273 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2DP55273 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.14■□□□□ 0.01
CDKN2DP55273 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CDKN2DP55273 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.14■□□□□ 0.01
CDKN2DP55273 AL049840.4-201ENST00000602422 811 ntBASIC15.14■□□□□ 0.01
CDKN2DP55273 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.14■□□□□ 0.01
CDKN2DP55273 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2DP55273 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKN2DP55273 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2DP55273 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKN2DP55273 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2DP55273 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CDKN2DP55273 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CDKN2DP55273 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CDKN2DP55273 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.14■□□□□ 0.01
CDKN2DP55273 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2DP55273 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2DP55273 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CDKN2DP55273 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2DP55273 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2DP55273 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2DP55273 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.14■□□□□ 0.01
CDKN2DP55273 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2DP55273 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CDKN2DP55273 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CDKN2DP55273 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.14■□□□□ 0.01
CDKN2DP55273 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKN2DP55273 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CDKN2DP55273 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.13■□□□□ 0.01
CDKN2DP55273 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.13■□□□□ 0.01
CDKN2DP55273 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKN2DP55273 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKN2DP55273 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.13■□□□□ 0.01
CDKN2DP55273 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CDKN2DP55273 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKN2DP55273 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKN2DP55273 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CDKN2DP55273 AC026748.1-201ENST00000624349 3251 ntBASIC15.13■□□□□ 0.01
CDKN2DP55273 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKN2DP55273 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CDKN2DP55273 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.13■□□□□ 0.01
CDKN2DP55273 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKN2DP55273 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDKN2DP55273 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKN2DP55273 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKN2DP55273 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKN2DP55273 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CDKN2DP55273 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.13■□□□□ 0.01
CDKN2DP55273 UGT1A2P-201ENST00000454886 866 ntBASIC15.13■□□□□ 0.01
CDKN2DP55273 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.13■□□□□ 0.01
CDKN2DP55273 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKN2DP55273 AC026410.3-201ENST00000514280 936 ntBASIC15.13■□□□□ 0.01
CDKN2DP55273 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.13■□□□□ 0.01
CDKN2DP55273 AC107373.2-201ENST00000607735 490 ntBASIC15.13■□□□□ 0.01
CDKN2DP55273 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CDKN2DP55273 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CDKN2DP55273 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDKN2DP55273 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKN2DP55273 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CDKN2DP55273 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CDKN2DP55273 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
CDKN2DP55273 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CDKN2DP55273 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.12■□□□□ 0.01
CDKN2DP55273 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms