Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 FO538757.1-201ENST00000623083 1397 ntBASIC13.39□□□□□ -0.27
ATP1B3P54709 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.39□□□□□ -0.27
ATP1B3P54709 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 FGD5P1-202ENST00000614866 2498 ntBASIC13.39□□□□□ -0.27
ATP1B3P54709 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ATP1B3P54709 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
ATP1B3P54709 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
ATP1B3P54709 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
ATP1B3P54709 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ATP1B3P54709 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.39□□□□□ -0.27
ATP1B3P54709 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.39□□□□□ -0.27
ATP1B3P54709 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.39□□□□□ -0.27
ATP1B3P54709 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.39□□□□□ -0.27
ATP1B3P54709 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.39□□□□□ -0.27
ATP1B3P54709 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.39□□□□□ -0.27
ATP1B3P54709 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ATP1B3P54709 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.38□□□□□ -0.27
ATP1B3P54709 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ATP1B3P54709 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ATP1B3P54709 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.38□□□□□ -0.27
ATP1B3P54709 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 AC254562.1-201ENST00000417586 456 ntBASIC13.38□□□□□ -0.27
ATP1B3P54709 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.38□□□□□ -0.27
ATP1B3P54709 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.38□□□□□ -0.27
ATP1B3P54709 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.38□□□□□ -0.27
ATP1B3P54709 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.38□□□□□ -0.27
ATP1B3P54709 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.38□□□□□ -0.27
ATP1B3P54709 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
ATP1B3P54709 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
ATP1B3P54709 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ATP1B3P54709 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ATP1B3P54709 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.38□□□□□ -0.27
ATP1B3P54709 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.38□□□□□ -0.27
ATP1B3P54709 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
ATP1B3P54709 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ATP1B3P54709 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ATP1B3P54709 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.38□□□□□ -0.27
ATP1B3P54709 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATP1B3P54709 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATP1B3P54709 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ATP1B3P54709 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATP1B3P54709 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATP1B3P54709 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.37□□□□□ -0.27
ATP1B3P54709 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATP1B3P54709 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.37□□□□□ -0.27
ATP1B3P54709 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATP1B3P54709 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATP1B3P54709 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATP1B3P54709 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
ATP1B3P54709 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATP1B3P54709 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.37□□□□□ -0.27
ATP1B3P54709 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATP1B3P54709 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATP1B3P54709 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATP1B3P54709 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATP1B3P54709 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATP1B3P54709 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATP1B3P54709 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATP1B3P54709 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.37□□□□□ -0.27
ATP1B3P54709 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms