Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB2P52799 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB2P52799 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB2P52799 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
EFNB2P52799 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB2P52799 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB2P52799 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB2P52799 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB2P52799 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.32□□□□□ -0.28
EFNB2P52799 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB2P52799 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
EFNB2P52799 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB2P52799 TFAMP1-201ENST00000412727 736 ntBASIC13.32□□□□□ -0.28
EFNB2P52799 GHSR-202ENST00000427970 912 ntBASIC13.32□□□□□ -0.28
EFNB2P52799 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.32□□□□□ -0.28
EFNB2P52799 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.32□□□□□ -0.28
EFNB2P52799 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
EFNB2P52799 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB2P52799 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.32□□□□□ -0.28
EFNB2P52799 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.32□□□□□ -0.28
EFNB2P52799 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
EFNB2P52799 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.32□□□□□ -0.28
EFNB2P52799 AC025678.2-201ENST00000562061 970 ntBASIC13.32□□□□□ -0.28
EFNB2P52799 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.32□□□□□ -0.28
EFNB2P52799 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.32□□□□□ -0.28
EFNB2P52799 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.32□□□□□ -0.28
EFNB2P52799 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.32□□□□□ -0.28
EFNB2P52799 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.32□□□□□ -0.28
EFNB2P52799 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
EFNB2P52799 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB2P52799 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
EFNB2P52799 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.32□□□□□ -0.28
EFNB2P52799 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB2P52799 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB2P52799 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB2P52799 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
EFNB2P52799 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB2P52799 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB2P52799 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.32□□□□□ -0.28
EFNB2P52799 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
EFNB2P52799 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
EFNB2P52799 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.32□□□□□ -0.28
EFNB2P52799 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
EFNB2P52799 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB2P52799 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB2P52799 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB2P52799 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
EFNB2P52799 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB2P52799 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
EFNB2P52799 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
EFNB2P52799 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB2P52799 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.31□□□□□ -0.28
EFNB2P52799 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.31□□□□□ -0.28
EFNB2P52799 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
EFNB2P52799 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB2P52799 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB2P52799 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB2P52799 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
EFNB2P52799 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB2P52799 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB2P52799 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
EFNB2P52799 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB2P52799 HLA-H-201ENST00000383620 1096 ntBASIC13.31□□□□□ -0.28
EFNB2P52799 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB2P52799 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.31□□□□□ -0.28
EFNB2P52799 SPDYE11-202ENST00000450699 704 ntBASIC13.31□□□□□ -0.28
EFNB2P52799 RN7SL589P-201ENST00000481268 310 ntBASIC13.31□□□□□ -0.28
EFNB2P52799 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.31□□□□□ -0.28
EFNB2P52799 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
EFNB2P52799 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC13.31□□□□□ -0.28
EFNB2P52799 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.31□□□□□ -0.28
EFNB2P52799 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.31□□□□□ -0.28
EFNB2P52799 AP000842.3-202ENST00000569238 1080 ntBASIC13.31□□□□□ -0.28
EFNB2P52799 SPDYE9P-201ENST00000570642 692 ntBASIC13.31□□□□□ -0.28
EFNB2P52799 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.31□□□□□ -0.28
EFNB2P52799 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
EFNB2P52799 LINC02084-201ENST00000606069 1096 ntBASIC13.31□□□□□ -0.28
EFNB2P52799 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB2P52799 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB2P52799 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.31□□□□□ -0.28
EFNB2P52799 SPDYE10P-202ENST00000612005 668 ntBASIC13.31□□□□□ -0.28
EFNB2P52799 SPDYE8P-202ENST00000612377 668 ntBASIC13.31□□□□□ -0.28
EFNB2P52799 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.31□□□□□ -0.28
EFNB2P52799 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
EFNB2P52799 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
EFNB2P52799 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB2P52799 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB2P52799 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.31□□□□□ -0.28
EFNB2P52799 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.31□□□□□ -0.28
EFNB2P52799 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.31□□□□□ -0.28
EFNB2P52799 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB2P52799 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB2P52799 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB2P52799 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB2P52799 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB2P52799 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
EFNB2P52799 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
EFNB2P52799 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
EFNB2P52799 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
EFNB2P52799 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms