Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AC112693.3-201ENST00000624819 1983 ntBASIC14.53□□□□□ -0.08
CLK1P49759 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CLK1P49759 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.52□□□□□ -0.08
CLK1P49759 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
CLK1P49759 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLK1P49759 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLK1P49759 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLK1P49759 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLK1P49759 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.52□□□□□ -0.08
CLK1P49759 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLK1P49759 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
CLK1P49759 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.52□□□□□ -0.08
CLK1P49759 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.52□□□□□ -0.08
CLK1P49759 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLK1P49759 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLK1P49759 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.52□□□□□ -0.08
CLK1P49759 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLK1P49759 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLK1P49759 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CLK1P49759 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.52□□□□□ -0.08
CLK1P49759 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLK1P49759 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLK1P49759 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.52□□□□□ -0.08
CLK1P49759 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.52□□□□□ -0.08
CLK1P49759 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLK1P49759 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.52□□□□□ -0.08
CLK1P49759 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CLK1P49759 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLK1P49759 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CLK1P49759 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CLK1P49759 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLK1P49759 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.52□□□□□ -0.09
CLK1P49759 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CLK1P49759 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.52□□□□□ -0.09
CLK1P49759 AC069262.1-201ENST00000539058 672 ntBASIC14.52□□□□□ -0.09
CLK1P49759 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CLK1P49759 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
CLK1P49759 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLK1P49759 LINC00628-201ENST00000628516 1289 ntBASIC14.52□□□□□ -0.09
CLK1P49759 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.52□□□□□ -0.09
CLK1P49759 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CLK1P49759 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLK1P49759 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.52□□□□□ -0.09
CLK1P49759 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLK1P49759 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CLK1P49759 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLK1P49759 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLK1P49759 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLK1P49759 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.52□□□□□ -0.09
CLK1P49759 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CLK1P49759 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CLK1P49759 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.52□□□□□ -0.09
CLK1P49759 FGD5P1-202ENST00000614866 2498 ntBASIC14.52□□□□□ -0.09
CLK1P49759 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CLK1P49759 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLK1P49759 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLK1P49759 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CLK1P49759 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.52□□□□□ -0.09
CLK1P49759 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CLK1P49759 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CLK1P49759 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CLK1P49759 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.52□□□□□ -0.09
CLK1P49759 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLK1P49759 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.51□□□□□ -0.09
CLK1P49759 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLK1P49759 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLK1P49759 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLK1P49759 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLK1P49759 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLK1P49759 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CLK1P49759 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.51□□□□□ -0.09
CLK1P49759 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.51□□□□□ -0.09
CLK1P49759 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLK1P49759 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLK1P49759 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.51□□□□□ -0.09
CLK1P49759 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLK1P49759 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CLK1P49759 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLK1P49759 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
CLK1P49759 TSEN15P1-201ENST00000423257 515 ntBASIC14.51□□□□□ -0.09
CLK1P49759 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLK1P49759 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLK1P49759 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLK1P49759 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CLK1P49759 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.51□□□□□ -0.09
CLK1P49759 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.51□□□□□ -0.09
CLK1P49759 AC006538.3-201ENST00000612495 578 ntBASIC14.51□□□□□ -0.09
CLK1P49759 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CLK1P49759 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLK1P49759 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.51□□□□□ -0.09
CLK1P49759 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.51□□□□□ -0.09
CLK1P49759 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLK1P49759 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLK1P49759 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CLK1P49759 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
CLK1P49759 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLK1P49759 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLK1P49759 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CLK1P49759 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CLK1P49759 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms