Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
COL15A1P39059 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL15A1P39059 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL15A1P39059 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL15A1P39059 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL15A1P39059 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL15A1P39059 AL139384.1-201ENST00000612143 3047 ntBASIC19.16■□□□□ 0.66
COL15A1P39059 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL15A1P39059 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL15A1P39059 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL15A1P39059 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL15A1P39059 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
COL15A1P39059 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL15A1P39059 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
COL15A1P39059 AC253536.4-201ENST00000440539 267 ntBASIC19.16■□□□□ 0.66
COL15A1P39059 AC104073.2-201ENST00000453737 312 ntBASIC19.16■□□□□ 0.66
COL15A1P39059 AC125604.1-201ENST00000496255 707 ntBASIC19.16■□□□□ 0.66
COL15A1P39059 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC19.16■□□□□ 0.66
COL15A1P39059 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC19.16■□□□□ 0.66
COL15A1P39059 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL15A1P39059 RN7SL163P-201ENST00000583100 276 ntBASIC19.16■□□□□ 0.66
COL15A1P39059 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC19.16■□□□□ 0.66
COL15A1P39059 AC090164.2-201ENST00000611487 516 ntBASIC19.16■□□□□ 0.66
COL15A1P39059 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC19.16■□□□□ 0.66
COL15A1P39059 AP000346.4-201ENST00000614827 381 ntBASIC19.16■□□□□ 0.66
COL15A1P39059 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC19.16■□□□□ 0.66
COL15A1P39059 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
COL15A1P39059 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL15A1P39059 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL15A1P39059 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL15A1P39059 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC19.16■□□□□ 0.66
COL15A1P39059 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC19.16■□□□□ 0.66
COL15A1P39059 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC19.16■□□□□ 0.66
COL15A1P39059 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
COL15A1P39059 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
COL15A1P39059 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC19.16■□□□□ 0.66
COL15A1P39059 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
COL15A1P39059 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
COL15A1P39059 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
COL15A1P39059 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL15A1P39059 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
COL15A1P39059 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL15A1P39059 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC19.15■□□□□ 0.66
COL15A1P39059 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
COL15A1P39059 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC19.15■□□□□ 0.66
COL15A1P39059 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL15A1P39059 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
COL15A1P39059 ZBTB45P1-201ENST00000452761 1456 ntBASIC19.15■□□□□ 0.66
COL15A1P39059 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL15A1P39059 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL15A1P39059 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC19.15■□□□□ 0.66
COL15A1P39059 UFM1-202ENST00000379649 846 ntTSL 4 BASIC19.15■□□□□ 0.66
COL15A1P39059 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL15A1P39059 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC19.15■□□□□ 0.66
COL15A1P39059 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC19.15■□□□□ 0.66
COL15A1P39059 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC19.15■□□□□ 0.66
COL15A1P39059 AL596276.2-201ENST00000447525 331 ntBASIC19.15■□□□□ 0.66
COL15A1P39059 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC19.15■□□□□ 0.66
COL15A1P39059 HNRNPA1P36-201ENST00000521313 955 ntBASIC19.15■□□□□ 0.66
COL15A1P39059 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC19.15■□□□□ 0.66
COL15A1P39059 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC19.15■□□□□ 0.66
COL15A1P39059 AC103988.2-201ENST00000561804 725 ntBASIC19.15■□□□□ 0.66
COL15A1P39059 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL15A1P39059 AC138696.2-201ENST00000607376 223 ntBASIC19.15■□□□□ 0.66
COL15A1P39059 AC018635.2-201ENST00000608625 364 ntBASIC19.15■□□□□ 0.66
COL15A1P39059 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
COL15A1P39059 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC19.15■□□□□ 0.66
COL15A1P39059 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL15A1P39059 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL15A1P39059 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL15A1P39059 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
COL15A1P39059 CICP6-201ENST00000457191 2729 ntBASIC19.15■□□□□ 0.66
COL15A1P39059 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL15A1P39059 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC19.15■□□□□ 0.66
COL15A1P39059 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
COL15A1P39059 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL15A1P39059 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
COL15A1P39059 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL15A1P39059 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL15A1P39059 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
COL15A1P39059 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL15A1P39059 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC19.14■□□□□ 0.66
COL15A1P39059 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL15A1P39059 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL15A1P39059 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
COL15A1P39059 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL15A1P39059 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL15A1P39059 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC19.14■□□□□ 0.65
COL15A1P39059 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL15A1P39059 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
COL15A1P39059 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL15A1P39059 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL15A1P39059 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
COL15A1P39059 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC19.14■□□□□ 0.65
COL15A1P39059 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL15A1P39059 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
COL15A1P39059 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL15A1P39059 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL15A1P39059 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
COL15A1P39059 AC010141.1-201ENST00000411585 623 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms