Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.46■□□□□ 0.39
COPB2P35606 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.46■□□□□ 0.39
COPB2P35606 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COPB2P35606 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.46■□□□□ 0.39
COPB2P35606 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.46■□□□□ 0.39
COPB2P35606 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.46■□□□□ 0.39
COPB2P35606 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.46■□□□□ 0.39
COPB2P35606 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COPB2P35606 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.46■□□□□ 0.39
COPB2P35606 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COPB2P35606 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COPB2P35606 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
COPB2P35606 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
COPB2P35606 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.46■□□□□ 0.39
COPB2P35606 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.46■□□□□ 0.39
COPB2P35606 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COPB2P35606 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
COPB2P35606 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COPB2P35606 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COPB2P35606 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COPB2P35606 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.46■□□□□ 0.39
COPB2P35606 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.46■□□□□ 0.39
COPB2P35606 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COPB2P35606 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
COPB2P35606 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
COPB2P35606 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
COPB2P35606 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.46■□□□□ 0.38
COPB2P35606 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPB2P35606 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPB2P35606 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPB2P35606 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPB2P35606 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPB2P35606 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPB2P35606 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.45■□□□□ 0.38
COPB2P35606 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPB2P35606 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.45■□□□□ 0.38
COPB2P35606 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
COPB2P35606 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COPB2P35606 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
COPB2P35606 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
COPB2P35606 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPB2P35606 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
COPB2P35606 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPB2P35606 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.45■□□□□ 0.38
COPB2P35606 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPB2P35606 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPB2P35606 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPB2P35606 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC17.45■□□□□ 0.38
COPB2P35606 SLC25A24P2-201ENST00000415059 510 ntBASIC17.45■□□□□ 0.38
COPB2P35606 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.45■□□□□ 0.38
COPB2P35606 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.45■□□□□ 0.38
COPB2P35606 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.45■□□□□ 0.38
COPB2P35606 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPB2P35606 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.45■□□□□ 0.38
COPB2P35606 OR10B1P-201ENST00000601666 907 ntBASIC17.45■□□□□ 0.38
COPB2P35606 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPB2P35606 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPB2P35606 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPB2P35606 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
COPB2P35606 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPB2P35606 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.45■□□□□ 0.38
COPB2P35606 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.45■□□□□ 0.38
COPB2P35606 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPB2P35606 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPB2P35606 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COPB2P35606 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.44■□□□□ 0.38
COPB2P35606 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COPB2P35606 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
COPB2P35606 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
COPB2P35606 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COPB2P35606 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
COPB2P35606 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
COPB2P35606 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
COPB2P35606 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COPB2P35606 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COPB2P35606 AL136309.1-201ENST00000403917 691 ntBASIC17.44■□□□□ 0.38
COPB2P35606 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.44■□□□□ 0.38
COPB2P35606 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COPB2P35606 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.44■□□□□ 0.38
COPB2P35606 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.44■□□□□ 0.38
COPB2P35606 FTLP10-202ENST00000505798 471 ntBASIC17.44■□□□□ 0.38
COPB2P35606 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.44■□□□□ 0.38
COPB2P35606 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.44■□□□□ 0.38
COPB2P35606 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COPB2P35606 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COPB2P35606 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.44■□□□□ 0.38
COPB2P35606 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.44■□□□□ 0.38
COPB2P35606 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
COPB2P35606 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COPB2P35606 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COPB2P35606 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.44■□□□□ 0.38
COPB2P35606 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
COPB2P35606 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.44■□□□□ 0.38
COPB2P35606 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
COPB2P35606 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
COPB2P35606 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
COPB2P35606 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
COPB2P35606 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
COPB2P35606 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.44■□□□□ 0.38
COPB2P35606 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms