Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC20.29■□□□□ 0.84
USP6P35125 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP6P35125 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC20.29■□□□□ 0.84
USP6P35125 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP6P35125 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
USP6P35125 SKA2-202ENST00000437036 625 ntTSL 2 BASIC20.29■□□□□ 0.84
USP6P35125 AC253536.4-201ENST00000440539 267 ntBASIC20.29■□□□□ 0.84
USP6P35125 LDHBP1-201ENST00000455730 1119 ntBASIC20.29■□□□□ 0.84
USP6P35125 VPS18-202ENST00000558474 873 ntTSL 3 BASIC20.29■□□□□ 0.84
USP6P35125 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC20.29■□□□□ 0.84
USP6P35125 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC20.29■□□□□ 0.84
USP6P35125 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC20.29■□□□□ 0.84
USP6P35125 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC20.29■□□□□ 0.84
USP6P35125 IRF3-215ENST00000596822 823 ntTSL 3 BASIC20.29■□□□□ 0.84
USP6P35125 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP6P35125 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP6P35125 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
USP6P35125 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
USP6P35125 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP6P35125 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP6P35125 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP6P35125 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
USP6P35125 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC20.29■□□□□ 0.84
USP6P35125 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
USP6P35125 CYP4F23P-201ENST00000593402 1579 ntBASIC20.29■□□□□ 0.84
USP6P35125 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC20.29■□□□□ 0.84
USP6P35125 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC20.29■□□□□ 0.84
USP6P35125 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC20.29■□□□□ 0.84
USP6P35125 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
USP6P35125 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
USP6P35125 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC20.29■□□□□ 0.84
USP6P35125 AC023024.2-201ENST00000623561 1993 ntBASIC20.29■□□□□ 0.84
USP6P35125 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
USP6P35125 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
USP6P35125 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC20.28■□□□□ 0.84
USP6P35125 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP6P35125 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP6P35125 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP6P35125 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP6P35125 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP6P35125 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC20.28■□□□□ 0.84
USP6P35125 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
USP6P35125 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC20.28■□□□□ 0.84
USP6P35125 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
USP6P35125 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
USP6P35125 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC20.28■□□□□ 0.84
USP6P35125 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP6P35125 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP6P35125 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP6P35125 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP6P35125 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC20.28■□□□□ 0.84
USP6P35125 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP6P35125 KRT8P21-201ENST00000430398 1491 ntBASIC20.28■□□□□ 0.84
USP6P35125 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP6P35125 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
USP6P35125 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
USP6P35125 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP6P35125 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP6P35125 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
USP6P35125 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC20.28■□□□□ 0.84
USP6P35125 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP6P35125 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
USP6P35125 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP6P35125 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP6P35125 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC20.27■□□□□ 0.84
USP6P35125 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
USP6P35125 RN7SL555P-201ENST00000584742 339 ntBASIC20.27■□□□□ 0.84
USP6P35125 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC20.27■□□□□ 0.84
USP6P35125 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP6P35125 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC20.27■□□□□ 0.84
USP6P35125 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP6P35125 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
USP6P35125 ZBED1P1-201ENST00000502364 1930 ntBASIC20.27■□□□□ 0.84
USP6P35125 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC20.27■□□□□ 0.84
USP6P35125 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
USP6P35125 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
USP6P35125 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP6P35125 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP6P35125 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP6P35125 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC20.27■□□□□ 0.84
USP6P35125 AC126365.1-201ENST00000578585 1514 ntBASIC20.27■□□□□ 0.84
USP6P35125 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC20.27■□□□□ 0.84
USP6P35125 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
USP6P35125 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP6P35125 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
USP6P35125 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP6P35125 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC20.27■□□□□ 0.84
USP6P35125 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP6P35125 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP6P35125 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP6P35125 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC20.27■□□□□ 0.84
USP6P35125 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP6P35125 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
USP6P35125 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
USP6P35125 FGFR3P1-201ENST00000449999 601 ntBASIC20.27■□□□□ 0.83
USP6P35125 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
USP6P35125 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC20.27■□□□□ 0.83
USP6P35125 AC009884.2-201ENST00000603110 324 ntBASIC20.27■□□□□ 0.83
USP6P35125 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC20.27■□□□□ 0.83
USP6P35125 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms