Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 CXCL1P1-201ENST00000502804 216 ntBASIC11.35□□□□□ -0.59
CKS2P33552 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC11.35□□□□□ -0.59
CKS2P33552 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC11.35□□□□□ -0.59
CKS2P33552 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC11.35□□□□□ -0.59
CKS2P33552 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC11.35□□□□□ -0.59
CKS2P33552 AC024267.1-201ENST00000582320 895 ntBASIC11.35□□□□□ -0.59
CKS2P33552 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC11.35□□□□□ -0.59
CKS2P33552 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 AC025062.2-201ENST00000605477 670 ntBASIC11.35□□□□□ -0.59
CKS2P33552 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC11.35□□□□□ -0.59
CKS2P33552 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
CKS2P33552 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC11.35□□□□□ -0.59
CKS2P33552 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
CKS2P33552 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC11.35□□□□□ -0.59
CKS2P33552 AC018529.2-202ENST00000611482 3087 ntBASIC11.35□□□□□ -0.59
CKS2P33552 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 AC004899.2-201ENST00000622993 3860 ntBASIC11.35□□□□□ -0.59
CKS2P33552 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
CKS2P33552 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
CKS2P33552 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC11.35□□□□□ -0.59
CKS2P33552 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC11.35□□□□□ -0.59
CKS2P33552 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
CKS2P33552 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
CKS2P33552 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
CKS2P33552 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC11.34□□□□□ -0.59
CKS2P33552 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC11.34□□□□□ -0.59
CKS2P33552 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC11.34□□□□□ -0.59
CKS2P33552 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC11.34□□□□□ -0.59
CKS2P33552 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC11.34□□□□□ -0.59
CKS2P33552 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC11.34□□□□□ -0.59
CKS2P33552 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC11.34□□□□□ -0.59
CKS2P33552 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC11.34□□□□□ -0.59
CKS2P33552 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC11.34□□□□□ -0.59
CKS2P33552 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 ATP6V0CP3-201ENST00000417255 467 ntBASIC11.34□□□□□ -0.59
CKS2P33552 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
CKS2P33552 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 PRYP6-201ENST00000514804 343 ntBASIC11.34□□□□□ -0.59
CKS2P33552 AC109635.5-201ENST00000533593 962 ntBASIC11.34□□□□□ -0.59
CKS2P33552 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC11.34□□□□□ -0.59
CKS2P33552 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC11.34□□□□□ -0.59
CKS2P33552 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 BCL10-202ENST00000620248 774 ntTSL 5 BASIC11.34□□□□□ -0.59
CKS2P33552 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC11.34□□□□□ -0.59
CKS2P33552 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
CKS2P33552 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
CKS2P33552 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC11.34□□□□□ -0.59
CKS2P33552 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC11.34□□□□□ -0.59
CKS2P33552 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC11.34□□□□□ -0.59
CKS2P33552 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC11.34□□□□□ -0.59
CKS2P33552 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC11.34□□□□□ -0.59
CKS2P33552 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC11.34□□□□□ -0.59
CKS2P33552 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC11.34□□□□□ -0.59
CKS2P33552 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
CKS2P33552 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC11.34□□□□□ -0.59
CKS2P33552 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CKS2P33552 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC11.33□□□□□ -0.59
CKS2P33552 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC11.33□□□□□ -0.59
CKS2P33552 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.59
CKS2P33552 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.59
CKS2P33552 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms