Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCKBRP32239 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
CCKBRP32239 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCKBRP32239 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCKBRP32239 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCKBRP32239 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCKBRP32239 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCKBRP32239 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCKBRP32239 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCKBRP32239 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.74□□□□□ -0.05
CCKBRP32239 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCKBRP32239 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.74□□□□□ -0.05
CCKBRP32239 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCKBRP32239 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CCKBRP32239 CALR4P-201ENST00000431943 946 ntBASIC14.74□□□□□ -0.05
CCKBRP32239 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.74□□□□□ -0.05
CCKBRP32239 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.74□□□□□ -0.05
CCKBRP32239 AC004898.1-201ENST00000451057 766 ntBASIC14.74□□□□□ -0.05
CCKBRP32239 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.74□□□□□ -0.05
CCKBRP32239 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.74□□□□□ -0.05
CCKBRP32239 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.74□□□□□ -0.05
CCKBRP32239 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.74□□□□□ -0.05
CCKBRP32239 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.74□□□□□ -0.05
CCKBRP32239 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCKBRP32239 AC005695.3-201ENST00000614522 232 ntBASIC14.74□□□□□ -0.05
CCKBRP32239 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCKBRP32239 AC015818.8-201ENST00000587907 1519 ntBASIC14.74□□□□□ -0.05
CCKBRP32239 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCKBRP32239 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCKBRP32239 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCKBRP32239 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCKBRP32239 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCKBRP32239 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCKBRP32239 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCKBRP32239 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCKBRP32239 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCKBRP32239 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.74□□□□□ -0.05
CCKBRP32239 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.74□□□□□ -0.05
CCKBRP32239 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCKBRP32239 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCKBRP32239 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CCKBRP32239 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CCKBRP32239 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CCKBRP32239 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.73□□□□□ -0.05
CCKBRP32239 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCKBRP32239 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCKBRP32239 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCKBRP32239 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC14.73□□□□□ -0.05
CCKBRP32239 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCKBRP32239 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCKBRP32239 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCKBRP32239 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
CCKBRP32239 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCKBRP32239 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.73□□□□□ -0.05
CCKBRP32239 AL645937.2-201ENST00000396808 931 ntBASIC14.73□□□□□ -0.05
CCKBRP32239 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.73□□□□□ -0.05
CCKBRP32239 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCKBRP32239 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
CCKBRP32239 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CCKBRP32239 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCKBRP32239 AC244452.3-201ENST00000636814 210 ntBASIC14.73□□□□□ -0.05
CCKBRP32239 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.73□□□□□ -0.05
CCKBRP32239 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCKBRP32239 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCKBRP32239 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCKBRP32239 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCKBRP32239 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.73□□□□□ -0.05
CCKBRP32239 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CCKBRP32239 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCKBRP32239 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CCKBRP32239 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CCKBRP32239 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.73□□□□□ -0.05
CCKBRP32239 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.73□□□□□ -0.05
CCKBRP32239 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.72□□□□□ -0.05
CCKBRP32239 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCKBRP32239 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCKBRP32239 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.72□□□□□ -0.05
CCKBRP32239 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
CCKBRP32239 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.72□□□□□ -0.05
CCKBRP32239 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.72□□□□□ -0.05
CCKBRP32239 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
CCKBRP32239 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCKBRP32239 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCKBRP32239 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.72□□□□□ -0.05
CCKBRP32239 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCKBRP32239 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.72□□□□□ -0.05
CCKBRP32239 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.72□□□□□ -0.05
CCKBRP32239 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.72□□□□□ -0.05
CCKBRP32239 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCKBRP32239 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCKBRP32239 TPM3P8-201ENST00000330554 643 ntBASIC14.72□□□□□ -0.05
CCKBRP32239 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCKBRP32239 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.72□□□□□ -0.05
CCKBRP32239 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CCKBRP32239 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCKBRP32239 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CCKBRP32239 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CCKBRP32239 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.72□□□□□ -0.05
CCKBRP32239 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.72□□□□□ -0.05
CCKBRP32239 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms