Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.67□□□□□ -0.22
HOXC12P31275 AL049840.4-201ENST00000602422 811 ntBASIC13.67□□□□□ -0.22
HOXC12P31275 AC133539.2-201ENST00000604757 467 ntBASIC13.67□□□□□ -0.22
HOXC12P31275 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HOXC12P31275 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.67□□□□□ -0.22
HOXC12P31275 AC068587.10-201ENST00000641210 219 ntBASIC13.67□□□□□ -0.22
HOXC12P31275 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HOXC12P31275 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
HOXC12P31275 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.67□□□□□ -0.22
HOXC12P31275 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HOXC12P31275 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
HOXC12P31275 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.67□□□□□ -0.22
HOXC12P31275 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.67□□□□□ -0.22
HOXC12P31275 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HOXC12P31275 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HOXC12P31275 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HOXC12P31275 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.67□□□□□ -0.22
HOXC12P31275 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
HOXC12P31275 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
HOXC12P31275 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HOXC12P31275 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
HOXC12P31275 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HOXC12P31275 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HOXC12P31275 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
HOXC12P31275 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.66□□□□□ -0.22
HOXC12P31275 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
HOXC12P31275 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
HOXC12P31275 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.66□□□□□ -0.22
HOXC12P31275 INTS4P2-202ENST00000614726 2019 ntBASIC13.66□□□□□ -0.22
HOXC12P31275 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.66□□□□□ -0.22
HOXC12P31275 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HOXC12P31275 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HOXC12P31275 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.66□□□□□ -0.22
HOXC12P31275 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.66□□□□□ -0.22
HOXC12P31275 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HOXC12P31275 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.66□□□□□ -0.22
HOXC12P31275 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HOXC12P31275 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HOXC12P31275 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HOXC12P31275 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HOXC12P31275 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
HOXC12P31275 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.66□□□□□ -0.22
HOXC12P31275 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
HOXC12P31275 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.66□□□□□ -0.22
HOXC12P31275 SOCS2P1-201ENST00000417727 557 ntBASIC13.66□□□□□ -0.22
HOXC12P31275 AC134915.1-201ENST00000426461 574 ntBASIC13.66□□□□□ -0.22
HOXC12P31275 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.66□□□□□ -0.22
HOXC12P31275 AL162726.2-201ENST00000438986 1017 ntBASIC13.66□□□□□ -0.22
HOXC12P31275 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.66□□□□□ -0.22
HOXC12P31275 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.66□□□□□ -0.22
HOXC12P31275 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HOXC12P31275 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.66□□□□□ -0.22
HOXC12P31275 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.66□□□□□ -0.22
HOXC12P31275 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.66□□□□□ -0.22
HOXC12P31275 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.66□□□□□ -0.22
HOXC12P31275 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HOXC12P31275 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
HOXC12P31275 AL365203.3-201ENST00000609742 2057 ntBASIC13.66□□□□□ -0.22
HOXC12P31275 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HOXC12P31275 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.66□□□□□ -0.22
HOXC12P31275 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HOXC12P31275 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
HOXC12P31275 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HOXC12P31275 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HOXC12P31275 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HOXC12P31275 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HOXC12P31275 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HOXC12P31275 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HOXC12P31275 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HOXC12P31275 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
HOXC12P31275 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
HOXC12P31275 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.66□□□□□ -0.22
HOXC12P31275 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
HOXC12P31275 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.65□□□□□ -0.22
HOXC12P31275 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HOXC12P31275 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.65□□□□□ -0.22
HOXC12P31275 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HOXC12P31275 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HOXC12P31275 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
HOXC12P31275 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HOXC12P31275 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HOXC12P31275 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HOXC12P31275 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.65□□□□□ -0.22
HOXC12P31275 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
HOXC12P31275 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
HOXC12P31275 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.65□□□□□ -0.22
HOXC12P31275 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HOXC12P31275 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
HOXC12P31275 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HOXC12P31275 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.65□□□□□ -0.22
HOXC12P31275 HYMAI-201ENST00000635591 3347 ntBASIC13.65□□□□□ -0.22
HOXC12P31275 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.65□□□□□ -0.22
HOXC12P31275 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
HOXC12P31275 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HOXC12P31275 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HOXC12P31275 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HOXC12P31275 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.65□□□□□ -0.22
HOXC12P31275 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.65□□□□□ -0.22
HOXC12P31275 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.65□□□□□ -0.22
HOXC12P31275 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms