Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 IGHV3-37-201ENST00000518544 340 ntBASIC18.68■□□□□ 0.58
TM4SF1P30408 AC005632.3-201ENST00000605544 308 ntBASIC18.68■□□□□ 0.58
TM4SF1P30408 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF1P30408 AC144522.1-201ENST00000625111 1658 ntBASIC18.68■□□□□ 0.58
TM4SF1P30408 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.68■□□□□ 0.58
TM4SF1P30408 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF1P30408 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF1P30408 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF1P30408 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF1P30408 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF1P30408 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF1P30408 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF1P30408 CYP4F23P-201ENST00000593402 1579 ntBASIC18.68■□□□□ 0.58
TM4SF1P30408 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TM4SF1P30408 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.67■□□□□ 0.58
TM4SF1P30408 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF1P30408 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.67■□□□□ 0.58
TM4SF1P30408 STK26-204ENST00000481105 1835 ntTSL 2 BASIC18.67■□□□□ 0.58
TM4SF1P30408 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.67■□□□□ 0.58
TM4SF1P30408 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC18.67■□□□□ 0.58
TM4SF1P30408 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TM4SF1P30408 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF1P30408 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF1P30408 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF1P30408 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF1P30408 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF1P30408 AC003102.2-201ENST00000589195 1469 ntBASIC18.67■□□□□ 0.58
TM4SF1P30408 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.67■□□□□ 0.58
TM4SF1P30408 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.67■□□□□ 0.58
TM4SF1P30408 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF1P30408 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
TM4SF1P30408 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TM4SF1P30408 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF1P30408 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF1P30408 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF1P30408 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC18.67■□□□□ 0.58
TM4SF1P30408 AC097065.1-201ENST00000425737 517 ntBASIC18.67■□□□□ 0.58
TM4SF1P30408 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC18.67■□□□□ 0.58
TM4SF1P30408 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC18.67■□□□□ 0.58
TM4SF1P30408 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF1P30408 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC18.67■□□□□ 0.58
TM4SF1P30408 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
TM4SF1P30408 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC18.67■□□□□ 0.58
TM4SF1P30408 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC18.67■□□□□ 0.58
TM4SF1P30408 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF1P30408 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
TM4SF1P30408 AC027601.3-201ENST00000622907 509 ntBASIC18.67■□□□□ 0.58
TM4SF1P30408 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TM4SF1P30408 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC18.67■□□□□ 0.58
TM4SF1P30408 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF1P30408 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF1P30408 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TM4SF1P30408 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF1P30408 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
TM4SF1P30408 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC18.67■□□□□ 0.58
TM4SF1P30408 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF1P30408 AL359258.3-201ENST00000622910 2331 ntBASIC18.67■□□□□ 0.58
TM4SF1P30408 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF1P30408 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TM4SF1P30408 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC18.66■□□□□ 0.58
TM4SF1P30408 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
TM4SF1P30408 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM4SF1P30408 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
TM4SF1P30408 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM4SF1P30408 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM4SF1P30408 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM4SF1P30408 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TM4SF1P30408 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
TM4SF1P30408 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TM4SF1P30408 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM4SF1P30408 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TM4SF1P30408 AL645933.1-201ENST00000440087 609 ntBASIC18.66■□□□□ 0.58
TM4SF1P30408 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC18.66■□□□□ 0.58
TM4SF1P30408 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC18.66■□□□□ 0.58
TM4SF1P30408 AC006122.1-201ENST00000493323 440 ntBASIC18.66■□□□□ 0.58
TM4SF1P30408 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TM4SF1P30408 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC18.66■□□□□ 0.58
TM4SF1P30408 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC18.66■□□□□ 0.58
TM4SF1P30408 AC007881.3-201ENST00000608897 607 ntBASIC18.66■□□□□ 0.58
TM4SF1P30408 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC18.66■□□□□ 0.58
TM4SF1P30408 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC18.66■□□□□ 0.58
TM4SF1P30408 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM4SF1P30408 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TM4SF1P30408 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.66■□□□□ 0.58
TM4SF1P30408 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TM4SF1P30408 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TM4SF1P30408 FRMPD2B-201ENST00000431305 1347 ntBASIC18.66■□□□□ 0.58
TM4SF1P30408 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM4SF1P30408 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM4SF1P30408 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TM4SF1P30408 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TM4SF1P30408 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TM4SF1P30408 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TM4SF1P30408 RAN-210ENST00000541630 1475 ntTSL 2 BASIC18.65■□□□□ 0.58
TM4SF1P30408 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TM4SF1P30408 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.65■□□□□ 0.58
TM4SF1P30408 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TM4SF1P30408 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TM4SF1P30408 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TM4SF1P30408 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms