Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC009407.1-201ENST00000568958 598 ntBASIC14.58□□□□□ -0.08
PTPN6P29350 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.58□□□□□ -0.08
PTPN6P29350 MIR3197-201ENST00000582241 73 ntBASIC14.58□□□□□ -0.08
PTPN6P29350 MIR6069-201ENST00000620069 79 ntBASIC14.58□□□□□ -0.08
PTPN6P29350 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.58□□□□□ -0.08
PTPN6P29350 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PTPN6P29350 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PTPN6P29350 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PTPN6P29350 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PTPN6P29350 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PTPN6P29350 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.58□□□□□ -0.08
PTPN6P29350 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PTPN6P29350 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.58□□□□□ -0.08
PTPN6P29350 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PTPN6P29350 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.58□□□□□ -0.08
PTPN6P29350 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PTPN6P29350 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PTPN6P29350 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PTPN6P29350 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.58□□□□□ -0.08
PTPN6P29350 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.08
PTPN6P29350 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.57□□□□□ -0.08
PTPN6P29350 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
PTPN6P29350 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTPN6P29350 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTPN6P29350 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PTPN6P29350 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PTPN6P29350 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PTPN6P29350 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTPN6P29350 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTPN6P29350 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTPN6P29350 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTPN6P29350 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTPN6P29350 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
PTPN6P29350 TOMM22P5-201ENST00000416399 439 ntBASIC14.57□□□□□ -0.08
PTPN6P29350 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.57□□□□□ -0.08
PTPN6P29350 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.57□□□□□ -0.08
PTPN6P29350 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.57□□□□□ -0.08
PTPN6P29350 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.57□□□□□ -0.08
PTPN6P29350 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.57□□□□□ -0.08
PTPN6P29350 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.57□□□□□ -0.08
PTPN6P29350 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PTPN6P29350 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PTPN6P29350 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PTPN6P29350 LINC01115-203ENST00000606068 577 ntBASIC14.57□□□□□ -0.08
PTPN6P29350 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.57□□□□□ -0.08
PTPN6P29350 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.57□□□□□ -0.08
PTPN6P29350 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTPN6P29350 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTPN6P29350 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PTPN6P29350 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTPN6P29350 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.57□□□□□ -0.08
PTPN6P29350 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PTPN6P29350 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
PTPN6P29350 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PTPN6P29350 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTPN6P29350 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.57□□□□□ -0.08
PTPN6P29350 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTPN6P29350 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.57□□□□□ -0.08
PTPN6P29350 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTPN6P29350 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTPN6P29350 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PTPN6P29350 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
PTPN6P29350 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PTPN6P29350 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTPN6P29350 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PTPN6P29350 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PTPN6P29350 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTPN6P29350 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.56□□□□□ -0.08
PTPN6P29350 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTPN6P29350 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.56□□□□□ -0.08
PTPN6P29350 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PTPN6P29350 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTPN6P29350 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTPN6P29350 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.56□□□□□ -0.08
PTPN6P29350 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTPN6P29350 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.56□□□□□ -0.08
PTPN6P29350 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
PTPN6P29350 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.56□□□□□ -0.08
PTPN6P29350 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.56□□□□□ -0.08
PTPN6P29350 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTPN6P29350 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTPN6P29350 MIR661-201ENST00000384842 89 ntBASIC14.56□□□□□ -0.08
PTPN6P29350 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PTPN6P29350 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.56□□□□□ -0.08
PTPN6P29350 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.56□□□□□ -0.08
PTPN6P29350 FAM207CP-201ENST00000443486 507 ntBASIC14.56□□□□□ -0.08
PTPN6P29350 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PTPN6P29350 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.56□□□□□ -0.08
PTPN6P29350 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.56□□□□□ -0.08
PTPN6P29350 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.56□□□□□ -0.08
PTPN6P29350 AC008738.7-201ENST00000609744 511 ntBASIC14.56□□□□□ -0.08
PTPN6P29350 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.56□□□□□ -0.08
PTPN6P29350 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTPN6P29350 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PTPN6P29350 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.56□□□□□ -0.08
PTPN6P29350 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
PTPN6P29350 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PTPN6P29350 BX640514.1-201ENST00000583223 1918 ntBASIC14.56□□□□□ -0.08
PTPN6P29350 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
PTPN6P29350 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms