Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC19.51■□□□□ 0.71
RXRBP28702 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.51■□□□□ 0.71
RXRBP28702 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.51■□□□□ 0.71
RXRBP28702 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RXRBP28702 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RXRBP28702 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RXRBP28702 AC018638.5-201ENST00000450885 754 ntBASIC19.51■□□□□ 0.71
RXRBP28702 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC19.51■□□□□ 0.71
RXRBP28702 AC008026.2-201ENST00000495438 348 ntBASIC19.51■□□□□ 0.71
RXRBP28702 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC19.51■□□□□ 0.71
RXRBP28702 RN7SL602P-201ENST00000578326 324 ntBASIC19.51■□□□□ 0.71
RXRBP28702 RN7SL718P-201ENST00000581254 303 ntBASIC19.51■□□□□ 0.71
RXRBP28702 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC19.51■□□□□ 0.71
RXRBP28702 AP000769.1-203ENST00000637245 208 ntBASIC19.51■□□□□ 0.71
RXRBP28702 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RXRBP28702 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RXRBP28702 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
RXRBP28702 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RXRBP28702 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.51■□□□□ 0.71
RXRBP28702 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.51■□□□□ 0.71
RXRBP28702 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RXRBP28702 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RXRBP28702 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC19.51■□□□□ 0.71
RXRBP28702 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RXRBP28702 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RXRBP28702 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RXRBP28702 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RXRBP28702 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RXRBP28702 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
RXRBP28702 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.5■□□□□ 0.71
RXRBP28702 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RXRBP28702 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RXRBP28702 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC19.5■□□□□ 0.71
RXRBP28702 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
RXRBP28702 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RXRBP28702 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RXRBP28702 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RXRBP28702 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RXRBP28702 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RXRBP28702 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RXRBP28702 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RXRBP28702 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
RXRBP28702 KRT18P36-201ENST00000411618 1276 ntBASIC19.5■□□□□ 0.71
RXRBP28702 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC19.5■□□□□ 0.71
RXRBP28702 AHCYP3-201ENST00000420053 1279 ntBASIC19.5■□□□□ 0.71
RXRBP28702 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC19.5■□□□□ 0.71
RXRBP28702 AL022334.2-201ENST00000610000 484 ntBASIC19.5■□□□□ 0.71
RXRBP28702 LINC00244-201ENST00000625073 613 ntBASIC19.5■□□□□ 0.71
RXRBP28702 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RXRBP28702 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19.5■□□□□ 0.71
RXRBP28702 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RXRBP28702 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RXRBP28702 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RXRBP28702 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RXRBP28702 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.49■□□□□ 0.71
RXRBP28702 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RXRBP28702 AC005052.1-201ENST00000625181 2492 ntBASIC19.49■□□□□ 0.71
RXRBP28702 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
RXRBP28702 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RXRBP28702 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.49■□□□□ 0.71
RXRBP28702 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RXRBP28702 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
RXRBP28702 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RXRBP28702 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RXRBP28702 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RXRBP28702 CELP-201ENST00000411440 1249 ntTSL 5 BASIC19.49■□□□□ 0.71
RXRBP28702 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC19.49■□□□□ 0.71
RXRBP28702 EEF1DP5-201ENST00000431410 772 ntBASIC19.49■□□□□ 0.71
RXRBP28702 RGS5-216ENST00000449680 788 ntTSL 3 BASIC19.49■□□□□ 0.71
RXRBP28702 SCARNA12-201ENST00000459155 270 ntBASIC19.49■□□□□ 0.71
RXRBP28702 AC108724.1-201ENST00000481669 352 ntBASIC19.49■□□□□ 0.71
RXRBP28702 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC19.49■□□□□ 0.71
RXRBP28702 AC090820.1-201ENST00000519722 591 ntBASIC19.49■□□□□ 0.71
RXRBP28702 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC19.49■□□□□ 0.71
RXRBP28702 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC19.49■□□□□ 0.71
RXRBP28702 DIO3OS-211ENST00000557532 712 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RXRBP28702 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC19.49■□□□□ 0.71
RXRBP28702 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC19.49■□□□□ 0.71
RXRBP28702 TRMT112P3-201ENST00000580149 358 ntBASIC19.49■□□□□ 0.71
RXRBP28702 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC19.49■□□□□ 0.71
RXRBP28702 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RXRBP28702 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RXRBP28702 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RXRBP28702 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RXRBP28702 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RXRBP28702 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.49■□□□□ 0.71
RXRBP28702 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RXRBP28702 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RXRBP28702 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RXRBP28702 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RXRBP28702 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RXRBP28702 AL136172.1-201ENST00000598590 1394 ntBASIC19.48■□□□□ 0.71
RXRBP28702 AL137077.2-201ENST00000635124 1608 ntBASIC19.48■□□□□ 0.71
RXRBP28702 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RXRBP28702 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RXRBP28702 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RXRBP28702 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RXRBP28702 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RXRBP28702 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.48■□□□□ 0.71
RXRBP28702 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms