Protein–RNA interactions for Protein: P26441

CNTF, Ciliary neurotrophic factor, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFP26441 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CNTFP26441 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNTFP26441 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.34■□□□□ 0.05
CNTFP26441 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNTFP26441 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CNTFP26441 AC015802.1-201ENST00000588104 1449 ntBASIC15.34■□□□□ 0.05
CNTFP26441 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNTFP26441 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNTFP26441 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CNTFP26441 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CNTFP26441 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CNTFP26441 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CNTFP26441 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CNTFP26441 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CNTFP26441 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
CNTFP26441 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNTFP26441 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.33■□□□□ 0.04
CNTFP26441 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CNTFP26441 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
CNTFP26441 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.33■□□□□ 0.04
CNTFP26441 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNTFP26441 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNTFP26441 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNTFP26441 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNTFP26441 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
CNTFP26441 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNTFP26441 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
CNTFP26441 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
CNTFP26441 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.33■□□□□ 0.04
CNTFP26441 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.33■□□□□ 0.04
CNTFP26441 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.33■□□□□ 0.04
CNTFP26441 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.33■□□□□ 0.04
CNTFP26441 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.33■□□□□ 0.04
CNTFP26441 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.33■□□□□ 0.04
CNTFP26441 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.33■□□□□ 0.04
CNTFP26441 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.33■□□□□ 0.04
CNTFP26441 SAMD11P1-201ENST00000571429 661 ntBASIC15.33■□□□□ 0.04
CNTFP26441 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.33■□□□□ 0.04
CNTFP26441 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.33■□□□□ 0.04
CNTFP26441 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CNTFP26441 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.33■□□□□ 0.04
CNTFP26441 AC074044.1-201ENST00000609673 707 ntBASIC15.33■□□□□ 0.04
CNTFP26441 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.33■□□□□ 0.04
CNTFP26441 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.33■□□□□ 0.04
CNTFP26441 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNTFP26441 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNTFP26441 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CNTFP26441 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.33■□□□□ 0.04
CNTFP26441 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNTFP26441 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.33■□□□□ 0.04
CNTFP26441 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNTFP26441 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.33■□□□□ 0.04
CNTFP26441 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNTFP26441 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNTFP26441 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNTFP26441 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNTFP26441 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNTFP26441 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CNTFP26441 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTFP26441 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTFP26441 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.32■□□□□ 0.04
CNTFP26441 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTFP26441 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTFP26441 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CNTFP26441 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.32■□□□□ 0.04
CNTFP26441 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTFP26441 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNTFP26441 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTFP26441 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTFP26441 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CNTFP26441 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CNTFP26441 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
CNTFP26441 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CNTFP26441 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNTFP26441 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.32■□□□□ 0.04
CNTFP26441 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTFP26441 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CNTFP26441 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNTFP26441 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNTFP26441 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.32■□□□□ 0.04
CNTFP26441 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.32■□□□□ 0.04
CNTFP26441 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.32■□□□□ 0.04
CNTFP26441 TPT1P11-201ENST00000458482 498 ntBASIC15.32■□□□□ 0.04
CNTFP26441 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.32■□□□□ 0.04
CNTFP26441 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.32■□□□□ 0.04
CNTFP26441 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.32■□□□□ 0.04
CNTFP26441 AF228730.6-201ENST00000641497 218 ntBASIC15.32■□□□□ 0.04
CNTFP26441 AC084121.3-201ENST00000641716 218 ntBASIC15.32■□□□□ 0.04
CNTFP26441 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CNTFP26441 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTFP26441 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNTFP26441 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTFP26441 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.32■□□□□ 0.04
CNTFP26441 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTFP26441 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CNTFP26441 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTFP26441 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTFP26441 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTFP26441 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CNTFP26441 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms