Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL8A2P25067 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.97□□□□□ -0.33
COL8A2P25067 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL8A2P25067 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
COL8A2P25067 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
COL8A2P25067 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC12.97□□□□□ -0.33
COL8A2P25067 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL8A2P25067 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL8A2P25067 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL8A2P25067 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL8A2P25067 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL8A2P25067 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL8A2P25067 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
COL8A2P25067 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
COL8A2P25067 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
COL8A2P25067 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.96□□□□□ -0.33
COL8A2P25067 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
COL8A2P25067 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.96□□□□□ -0.33
COL8A2P25067 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
COL8A2P25067 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
COL8A2P25067 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
COL8A2P25067 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
COL8A2P25067 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
COL8A2P25067 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
COL8A2P25067 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.96□□□□□ -0.33
COL8A2P25067 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
COL8A2P25067 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
COL8A2P25067 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
COL8A2P25067 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
COL8A2P25067 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.96□□□□□ -0.33
COL8A2P25067 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
COL8A2P25067 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.96□□□□□ -0.33
COL8A2P25067 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
COL8A2P25067 AC099336.1-201ENST00000417053 1171 ntBASIC12.96□□□□□ -0.33
COL8A2P25067 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.96□□□□□ -0.33
COL8A2P25067 HLA-V-201ENST00000429037 534 ntBASIC12.96□□□□□ -0.33
COL8A2P25067 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.96□□□□□ -0.33
COL8A2P25067 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
COL8A2P25067 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.96□□□□□ -0.33
COL8A2P25067 AC004066.1-201ENST00000502488 802 ntBASIC12.96□□□□□ -0.33
COL8A2P25067 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.96□□□□□ -0.33
COL8A2P25067 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.96□□□□□ -0.33
COL8A2P25067 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.96□□□□□ -0.33
COL8A2P25067 MFF-223ENST00000524634 647 ntTSL 2 BASIC12.96□□□□□ -0.33
COL8A2P25067 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.96□□□□□ -0.33
COL8A2P25067 GNRHR2-203ENST00000581100 1187 ntBASIC12.96□□□□□ -0.33
COL8A2P25067 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
COL8A2P25067 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.96□□□□□ -0.33
COL8A2P25067 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
COL8A2P25067 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
COL8A2P25067 AC105250.1-201ENST00000509378 2057 ntBASIC12.96□□□□□ -0.33
COL8A2P25067 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
COL8A2P25067 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
COL8A2P25067 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
COL8A2P25067 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.96□□□□□ -0.34
COL8A2P25067 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
COL8A2P25067 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.96□□□□□ -0.34
COL8A2P25067 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
COL8A2P25067 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.96□□□□□ -0.34
COL8A2P25067 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.96□□□□□ -0.34
COL8A2P25067 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COL8A2P25067 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL8A2P25067 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COL8A2P25067 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL8A2P25067 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COL8A2P25067 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.95□□□□□ -0.34
COL8A2P25067 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COL8A2P25067 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL8A2P25067 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.95□□□□□ -0.34
COL8A2P25067 AC007787.1-201ENST00000588095 1583 ntBASIC12.95□□□□□ -0.34
COL8A2P25067 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL8A2P25067 KRT8P35-201ENST00000483942 1338 ntBASIC12.95□□□□□ -0.34
COL8A2P25067 AC068587.6-202ENST00000641839 5619 ntBASIC12.95□□□□□ -0.34
COL8A2P25067 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.95□□□□□ -0.34
COL8A2P25067 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL8A2P25067 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL8A2P25067 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL8A2P25067 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL8A2P25067 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COL8A2P25067 RNU1-114P-201ENST00000365297 166 ntBASIC12.95□□□□□ -0.34
COL8A2P25067 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL8A2P25067 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.95□□□□□ -0.34
COL8A2P25067 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.95□□□□□ -0.34
COL8A2P25067 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COL8A2P25067 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.95□□□□□ -0.34
COL8A2P25067 C2orf27AP3-201ENST00000434123 579 ntBASIC12.95□□□□□ -0.34
COL8A2P25067 AC114812.1-204ENST00000449669 728 ntBASIC12.95□□□□□ -0.34
COL8A2P25067 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
COL8A2P25067 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.95□□□□□ -0.34
COL8A2P25067 AP000812.2-201ENST00000538934 718 ntBASIC12.95□□□□□ -0.34
COL8A2P25067 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.95□□□□□ -0.34
COL8A2P25067 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.95□□□□□ -0.34
COL8A2P25067 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.95□□□□□ -0.34
COL8A2P25067 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.95□□□□□ -0.34
COL8A2P25067 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
COL8A2P25067 AL354718.3-201ENST00000616414 581 ntBASIC12.95□□□□□ -0.34
COL8A2P25067 MIR6799-201ENST00000620297 69 ntBASIC12.95□□□□□ -0.34
COL8A2P25067 CR382287.1-201ENST00000623954 586 ntBASIC12.95□□□□□ -0.34
COL8A2P25067 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COL8A2P25067 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms