Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 AL354877.1-201ENST00000424412 413 ntBASIC15.62■□□□□ 0.09
COL9A1P20849 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC15.62■□□□□ 0.09
COL9A1P20849 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL9A1P20849 RN7SL396P-201ENST00000471086 295 ntBASIC15.62■□□□□ 0.09
COL9A1P20849 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC15.62■□□□□ 0.09
COL9A1P20849 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC15.62■□□□□ 0.09
COL9A1P20849 AL079304.1-201ENST00000554595 828 ntTSL 2 BASIC15.62■□□□□ 0.09
COL9A1P20849 AC022087.1-201ENST00000558372 612 ntTSL 3 BASIC15.62■□□□□ 0.09
COL9A1P20849 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.62■□□□□ 0.09
COL9A1P20849 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL9A1P20849 MIR4472-1-201ENST00000584349 80 ntBASIC15.62■□□□□ 0.09
COL9A1P20849 AL512324.3-201ENST00000619383 882 ntBASIC15.62■□□□□ 0.09
COL9A1P20849 CR392039.1-201ENST00000623217 204 ntBASIC15.62■□□□□ 0.09
COL9A1P20849 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL9A1P20849 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL9A1P20849 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL9A1P20849 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL9A1P20849 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL9A1P20849 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
COL9A1P20849 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL9A1P20849 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.62■□□□□ 0.09
COL9A1P20849 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL9A1P20849 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL9A1P20849 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.62■□□□□ 0.09
COL9A1P20849 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.62■□□□□ 0.09
COL9A1P20849 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.62■□□□□ 0.09
COL9A1P20849 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL9A1P20849 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.62■□□□□ 0.09
COL9A1P20849 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL9A1P20849 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL9A1P20849 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL9A1P20849 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
COL9A1P20849 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
COL9A1P20849 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
COL9A1P20849 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
COL9A1P20849 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.62■□□□□ 0.09
COL9A1P20849 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL9A1P20849 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL9A1P20849 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.61■□□□□ 0.09
COL9A1P20849 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
COL9A1P20849 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.61■□□□□ 0.09
COL9A1P20849 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.61■□□□□ 0.09
COL9A1P20849 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
COL9A1P20849 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL9A1P20849 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
COL9A1P20849 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL9A1P20849 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.61■□□□□ 0.09
COL9A1P20849 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL9A1P20849 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COL9A1P20849 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL9A1P20849 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COL9A1P20849 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.61■□□□□ 0.09
COL9A1P20849 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.61■□□□□ 0.09
COL9A1P20849 RPL18AP3-201ENST00000462885 528 ntBASIC15.61■□□□□ 0.09
COL9A1P20849 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL9A1P20849 NPM1P28-201ENST00000492269 840 ntBASIC15.61■□□□□ 0.09
COL9A1P20849 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC15.61■□□□□ 0.09
COL9A1P20849 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC15.61■□□□□ 0.09
COL9A1P20849 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COL9A1P20849 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.61■□□□□ 0.09
COL9A1P20849 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC15.61■□□□□ 0.09
COL9A1P20849 AL137246.1-201ENST00000607072 977 ntBASIC15.61■□□□□ 0.09
COL9A1P20849 AL157762.1-201ENST00000619612 415 ntBASIC15.61■□□□□ 0.09
COL9A1P20849 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COL9A1P20849 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL9A1P20849 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
COL9A1P20849 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.61■□□□□ 0.09
COL9A1P20849 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.61■□□□□ 0.09
COL9A1P20849 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL9A1P20849 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL9A1P20849 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.61■□□□□ 0.09
COL9A1P20849 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL9A1P20849 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
COL9A1P20849 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.6■□□□□ 0.09
COL9A1P20849 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL9A1P20849 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.6■□□□□ 0.09
COL9A1P20849 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.6■□□□□ 0.09
COL9A1P20849 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.6■□□□□ 0.09
COL9A1P20849 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL9A1P20849 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.6■□□□□ 0.09
COL9A1P20849 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.6■□□□□ 0.09
COL9A1P20849 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.6■□□□□ 0.09
COL9A1P20849 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL9A1P20849 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
COL9A1P20849 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL9A1P20849 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.6■□□□□ 0.09
COL9A1P20849 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
COL9A1P20849 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL9A1P20849 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL9A1P20849 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
COL9A1P20849 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
COL9A1P20849 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
COL9A1P20849 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
COL9A1P20849 EIF2S2P3-201ENST00000428356 999 ntBASIC15.6■□□□□ 0.09
COL9A1P20849 AL392088.1-201ENST00000428364 670 ntBASIC15.6■□□□□ 0.09
COL9A1P20849 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.6■□□□□ 0.09
COL9A1P20849 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.6■□□□□ 0.09
COL9A1P20849 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.6■□□□□ 0.09
COL9A1P20849 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC15.6■□□□□ 0.09
COL9A1P20849 AC099542.2-201ENST00000474149 553 ntTSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms