Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
PTPN1P18031 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.21■□□□□ 0.19
PTPN1P18031 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN1P18031 HLA-K-203ENST00000430151 1046 ntBASIC16.21■□□□□ 0.19
PTPN1P18031 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN1P18031 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.21■□□□□ 0.19
PTPN1P18031 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
PTPN1P18031 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16.21■□□□□ 0.19
PTPN1P18031 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN1P18031 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.21■□□□□ 0.19
PTPN1P18031 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PTPN1P18031 AC025279.2-201ENST00000569730 653 ntBASIC16.21■□□□□ 0.19
PTPN1P18031 AC244669.2-201ENST00000612320 853 ntBASIC16.21■□□□□ 0.19
PTPN1P18031 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PTPN1P18031 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
PTPN1P18031 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PTPN1P18031 AC022532.1-201ENST00000624563 1728 ntBASIC16.21■□□□□ 0.19
PTPN1P18031 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PTPN1P18031 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PTPN1P18031 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.21■□□□□ 0.19
PTPN1P18031 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PTPN1P18031 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
PTPN1P18031 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
PTPN1P18031 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.21■□□□□ 0.18
PTPN1P18031 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
PTPN1P18031 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
PTPN1P18031 AL138709.1-201ENST00000614840 1693 ntBASIC16.21■□□□□ 0.18
PTPN1P18031 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PTPN1P18031 AL359258.3-201ENST00000622910 2331 ntBASIC16.2■□□□□ 0.18
PTPN1P18031 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN1P18031 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN1P18031 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPN1P18031 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN1P18031 AC073347.1-201ENST00000421633 2643 ntBASIC16.2■□□□□ 0.18
PTPN1P18031 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN1P18031 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN1P18031 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN1P18031 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPN1P18031 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN1P18031 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN1P18031 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPN1P18031 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.2■□□□□ 0.18
PTPN1P18031 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPN1P18031 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.2■□□□□ 0.18
PTPN1P18031 ANKRD19P-201ENST00000338192 862 ntBASIC16.2■□□□□ 0.18
PTPN1P18031 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPN1P18031 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.2■□□□□ 0.18
PTPN1P18031 MIR658-201ENST00000385210 100 ntBASIC16.2■□□□□ 0.18
PTPN1P18031 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
PTPN1P18031 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
PTPN1P18031 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PTPN1P18031 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPN1P18031 C2orf27AP3-201ENST00000434123 579 ntBASIC16.2■□□□□ 0.18
PTPN1P18031 KLF2P4-201ENST00000451959 1225 ntBASIC16.2■□□□□ 0.18
PTPN1P18031 CTBP2P5-201ENST00000454986 1264 ntBASIC16.2■□□□□ 0.18
PTPN1P18031 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
PTPN1P18031 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPN1P18031 AC104989.1-201ENST00000519711 778 ntBASIC16.2■□□□□ 0.18
PTPN1P18031 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PTPN1P18031 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.2■□□□□ 0.18
PTPN1P18031 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.2■□□□□ 0.18
PTPN1P18031 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PTPN1P18031 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.2■□□□□ 0.18
PTPN1P18031 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPN1P18031 AL008721.1-201ENST00000609964 604 ntBASIC16.2■□□□□ 0.18
PTPN1P18031 MIR6805-201ENST00000615055 62 ntBASIC16.2■□□□□ 0.18
PTPN1P18031 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PTPN1P18031 AL354718.3-201ENST00000616414 581 ntBASIC16.2■□□□□ 0.18
PTPN1P18031 CR382287.1-201ENST00000623954 586 ntBASIC16.2■□□□□ 0.18
PTPN1P18031 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN1P18031 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN1P18031 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPN1P18031 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN1P18031 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PTPN1P18031 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPN1P18031 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN1P18031 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PTPN1P18031 AL157414.3-201ENST00000624276 1954 ntBASIC16.2■□□□□ 0.18
PTPN1P18031 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PTPN1P18031 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN1P18031 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPN1P18031 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN1P18031 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPN1P18031 AC138035.3-201ENST00000622706 2791 ntBASIC16.2■□□□□ 0.18
PTPN1P18031 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
PTPN1P18031 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
PTPN1P18031 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN1P18031 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN1P18031 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN1P18031 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.19■□□□□ 0.18
PTPN1P18031 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN1P18031 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN1P18031 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN1P18031 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN1P18031 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN1P18031 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PTPN1P18031 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN1P18031 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN1P18031 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN1P18031 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms