Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1DP16402 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1DP16402 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1DP16402 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1DP16402 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1DP16402 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1DP16402 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1DP16402 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1DP16402 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1DP16402 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1DP16402 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1DP16402 AC023274.1-201ENST00000418278 595 ntBASIC13.05□□□□□ -0.32
HIST1H1DP16402 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 ALG1L8P-201ENST00000533887 760 ntBASIC13.05□□□□□ -0.32
HIST1H1DP16402 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1DP16402 KRT126P-201ENST00000549467 1181 ntBASIC13.05□□□□□ -0.32
HIST1H1DP16402 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1DP16402 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1DP16402 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1DP16402 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1DP16402 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1DP16402 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 BEND3P1-201ENST00000421591 1944 ntBASIC13.05□□□□□ -0.32
HIST1H1DP16402 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1DP16402 KRT8P12-202ENST00000472924 1397 ntBASIC13.05□□□□□ -0.32
HIST1H1DP16402 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1DP16402 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1DP16402 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1DP16402 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
HIST1H1DP16402 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1DP16402 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HIST1H1DP16402 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1DP16402 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1DP16402 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1DP16402 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
HIST1H1DP16402 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1DP16402 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1DP16402 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1DP16402 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.04□□□□□ -0.32
HIST1H1DP16402 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
HIST1H1DP16402 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
HIST1H1DP16402 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1DP16402 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1DP16402 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1DP16402 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1DP16402 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1DP16402 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1DP16402 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1DP16402 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1DP16402 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
HIST1H1DP16402 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
HIST1H1DP16402 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.04□□□□□ -0.32
HIST1H1DP16402 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.04□□□□□ -0.32
HIST1H1DP16402 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.04□□□□□ -0.32
HIST1H1DP16402 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1DP16402 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1DP16402 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.04□□□□□ -0.32
HIST1H1DP16402 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
HIST1H1DP16402 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
HIST1H1DP16402 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1DP16402 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1DP16402 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1DP16402 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
HIST1H1DP16402 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.04□□□□□ -0.32
HIST1H1DP16402 AC074338.1-201ENST00000416825 156 ntBASIC13.04□□□□□ -0.32
HIST1H1DP16402 AL590627.1-203ENST00000421194 1026 ntBASIC13.04□□□□□ -0.32
HIST1H1DP16402 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.04□□□□□ -0.32
HIST1H1DP16402 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HIST1H1DP16402 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms