Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.02■□□□□ 0.48
TOP1P11387 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.02■□□□□ 0.48
TOP1P11387 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.02■□□□□ 0.48
TOP1P11387 BCRP6-201ENST00000510112 632 ntBASIC18.02■□□□□ 0.48
TOP1P11387 BCRP7-201ENST00000511549 544 ntBASIC18.02■□□□□ 0.48
TOP1P11387 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.02■□□□□ 0.48
TOP1P11387 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.02■□□□□ 0.48
TOP1P11387 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TOP1P11387 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
TOP1P11387 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TOP1P11387 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TOP1P11387 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TOP1P11387 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.02■□□□□ 0.47
TOP1P11387 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
TOP1P11387 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
TOP1P11387 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TOP1P11387 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.02■□□□□ 0.47
TOP1P11387 AC099063.4-201ENST00000641099 1602 ntBASIC18.01■□□□□ 0.47
TOP1P11387 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TOP1P11387 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TOP1P11387 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TOP1P11387 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.01■□□□□ 0.47
TOP1P11387 SSR4P1-203ENST00000599569 2260 ntBASIC18.01■□□□□ 0.47
TOP1P11387 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TOP1P11387 AC007787.1-201ENST00000588095 1583 ntBASIC18.01■□□□□ 0.47
TOP1P11387 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TOP1P11387 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TOP1P11387 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TOP1P11387 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TOP1P11387 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TOP1P11387 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TOP1P11387 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TOP1P11387 PGGT1BP2-201ENST00000398621 1028 ntBASIC18.01■□□□□ 0.47
TOP1P11387 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.01■□□□□ 0.47
TOP1P11387 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
TOP1P11387 AL355864.2-201ENST00000447420 863 ntBASIC18.01■□□□□ 0.47
TOP1P11387 CROCCP4-201ENST00000457096 498 ntBASIC18.01■□□□□ 0.47
TOP1P11387 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC18.01■□□□□ 0.47
TOP1P11387 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TOP1P11387 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.01■□□□□ 0.47
TOP1P11387 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.01■□□□□ 0.47
TOP1P11387 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TOP1P11387 AC023157.3-201ENST00000619086 2088 ntBASIC18.01■□□□□ 0.47
TOP1P11387 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
TOP1P11387 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TOP1P11387 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TOP1P11387 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TOP1P11387 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TOP1P11387 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
TOP1P11387 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TOP1P11387 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TOP1P11387 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TOP1P11387 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.01■□□□□ 0.47
TOP1P11387 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TOP1P11387 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC18■□□□□ 0.47
TOP1P11387 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
TOP1P11387 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TOP1P11387 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18■□□□□ 0.47
TOP1P11387 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TOP1P11387 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC18■□□□□ 0.47
TOP1P11387 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
TOP1P11387 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TOP1P11387 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
TOP1P11387 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18■□□□□ 0.47
TOP1P11387 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TOP1P11387 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TOP1P11387 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18■□□□□ 0.47
TOP1P11387 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18■□□□□ 0.47
TOP1P11387 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TOP1P11387 AL136379.1-201ENST00000623471 2642 ntBASIC18■□□□□ 0.47
TOP1P11387 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18■□□□□ 0.47
TOP1P11387 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18■□□□□ 0.47
TOP1P11387 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TOP1P11387 AC092933.1-201ENST00000393644 945 ntBASIC18■□□□□ 0.47
TOP1P11387 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18■□□□□ 0.47
TOP1P11387 NUS1P3-201ENST00000423502 862 ntBASIC18■□□□□ 0.47
TOP1P11387 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
TOP1P11387 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC18■□□□□ 0.47
TOP1P11387 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18■□□□□ 0.47
TOP1P11387 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18■□□□□ 0.47
TOP1P11387 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC18■□□□□ 0.47
TOP1P11387 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
TOP1P11387 PRSS30P-206ENST00000641773 873 ntBASIC18■□□□□ 0.47
TOP1P11387 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TOP1P11387 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18■□□□□ 0.47
TOP1P11387 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TOP1P11387 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TOP1P11387 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TOP1P11387 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18■□□□□ 0.47
TOP1P11387 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18■□□□□ 0.47
TOP1P11387 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TOP1P11387 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TOP1P11387 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
TOP1P11387 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TOP1P11387 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TOP1P11387 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.99■□□□□ 0.47
TOP1P11387 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TOP1P11387 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.99■□□□□ 0.47
TOP1P11387 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TOP1P11387 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms