Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CTSDP07339 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.79□□□□□ -0.36
CTSDP07339 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.79□□□□□ -0.36
CTSDP07339 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CTSDP07339 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.79□□□□□ -0.36
CTSDP07339 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CTSDP07339 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CTSDP07339 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CTSDP07339 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC12.79□□□□□ -0.36
CTSDP07339 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CTSDP07339 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.79□□□□□ -0.36
CTSDP07339 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CTSDP07339 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.79□□□□□ -0.36
CTSDP07339 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.79□□□□□ -0.36
CTSDP07339 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.78□□□□□ -0.36
CTSDP07339 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
CTSDP07339 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 AL137784.3-201ENST00000623858 2288 ntBASIC12.78□□□□□ -0.36
CTSDP07339 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.78□□□□□ -0.36
CTSDP07339 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CTSDP07339 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.78□□□□□ -0.36
CTSDP07339 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CTSDP07339 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CTSDP07339 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 FO393414.2-201ENST00000405153 598 ntBASIC12.78□□□□□ -0.36
CTSDP07339 AL355306.1-201ENST00000415580 579 ntBASIC12.78□□□□□ -0.36
CTSDP07339 AL671277.1-201ENST00000429656 993 ntBASIC12.78□□□□□ -0.36
CTSDP07339 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC12.78□□□□□ -0.36
CTSDP07339 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.78□□□□□ -0.36
CTSDP07339 TPT1P11-201ENST00000458482 498 ntBASIC12.78□□□□□ -0.36
CTSDP07339 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.78□□□□□ -0.36
CTSDP07339 RPL13AP23-201ENST00000480739 586 ntBASIC12.78□□□□□ -0.36
CTSDP07339 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC12.78□□□□□ -0.36
CTSDP07339 FAM86C2P-203ENST00000528684 1004 ntBASIC12.78□□□□□ -0.36
CTSDP07339 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.78□□□□□ -0.36
CTSDP07339 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
CTSDP07339 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.78□□□□□ -0.36
CTSDP07339 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
CTSDP07339 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.78□□□□□ -0.36
CTSDP07339 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.78□□□□□ -0.36
CTSDP07339 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CTSDP07339 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.78□□□□□ -0.36
CTSDP07339 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.78□□□□□ -0.36
CTSDP07339 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC12.78□□□□□ -0.36
CTSDP07339 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CTSDP07339 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.78□□□□□ -0.36
CTSDP07339 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 AC104109.2-201ENST00000602919 1418 ntBASIC12.78□□□□□ -0.36
CTSDP07339 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.78□□□□□ -0.36
CTSDP07339 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
CTSDP07339 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.78□□□□□ -0.36
CTSDP07339 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
CTSDP07339 AC138969.2-201ENST00000532739 9932 ntBASIC12.78□□□□□ -0.36
CTSDP07339 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
CTSDP07339 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CTSDP07339 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
CTSDP07339 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CTSDP07339 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CTSDP07339 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
CTSDP07339 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
CTSDP07339 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.77□□□□□ -0.36
CTSDP07339 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CTSDP07339 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CTSDP07339 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.77□□□□□ -0.36
CTSDP07339 AC055811.4-201ENST00000624039 1754 ntBASIC12.77□□□□□ -0.36
CTSDP07339 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
CTSDP07339 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CTSDP07339 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CTSDP07339 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.77□□□□□ -0.37
CTSDP07339 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.77□□□□□ -0.37
CTSDP07339 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CTSDP07339 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms