Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
RB1P06400 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RB1P06400 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.06■□□□□ 0.16
RB1P06400 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RB1P06400 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.06■□□□□ 0.16
RB1P06400 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RB1P06400 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RB1P06400 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.06■□□□□ 0.16
RB1P06400 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RB1P06400 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RB1P06400 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RB1P06400 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RB1P06400 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RB1P06400 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RB1P06400 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RB1P06400 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RB1P06400 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RB1P06400 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RB1P06400 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
RB1P06400 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RB1P06400 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.05■□□□□ 0.16
RB1P06400 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RB1P06400 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RB1P06400 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RB1P06400 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RB1P06400 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
RB1P06400 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RB1P06400 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RB1P06400 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.05■□□□□ 0.16
RB1P06400 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.05■□□□□ 0.16
RB1P06400 RCC2P8-201ENST00000502779 1035 ntBASIC16.05■□□□□ 0.16
RB1P06400 AC116345.2-201ENST00000512837 523 ntBASIC16.05■□□□□ 0.16
RB1P06400 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
RB1P06400 IGLV3-15-201ENST00000518356 244 ntBASIC16.05■□□□□ 0.16
RB1P06400 POU5F1P2-201ENST00000521750 823 ntBASIC16.05■□□□□ 0.16
RB1P06400 AC009779.1-201ENST00000551138 283 ntBASIC16.05■□□□□ 0.16
RB1P06400 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
RB1P06400 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.05■□□□□ 0.16
RB1P06400 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.05■□□□□ 0.16
RB1P06400 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
RB1P06400 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RB1P06400 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RB1P06400 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RB1P06400 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RB1P06400 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RB1P06400 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RB1P06400 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RB1P06400 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RB1P06400 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RB1P06400 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RB1P06400 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RB1P06400 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RB1P06400 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.04■□□□□ 0.16
RB1P06400 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RB1P06400 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
RB1P06400 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.04■□□□□ 0.16
RB1P06400 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.04■□□□□ 0.16
RB1P06400 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RB1P06400 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RB1P06400 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RB1P06400 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RB1P06400 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
RB1P06400 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RB1P06400 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RB1P06400 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RB1P06400 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RB1P06400 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RB1P06400 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RB1P06400 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RB1P06400 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.04■□□□□ 0.16
RB1P06400 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.04■□□□□ 0.16
RB1P06400 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.04■□□□□ 0.16
RB1P06400 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.04■□□□□ 0.16
RB1P06400 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.04■□□□□ 0.16
RB1P06400 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.04■□□□□ 0.16
RB1P06400 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RB1P06400 MIR4754-201ENST00000582477 89 ntBASIC16.04■□□□□ 0.16
RB1P06400 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RB1P06400 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RB1P06400 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RB1P06400 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RB1P06400 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RB1P06400 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RB1P06400 LINC02447-202ENST00000501888 2146 ntBASIC16.04■□□□□ 0.16
RB1P06400 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RB1P06400 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RB1P06400 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RB1P06400 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RB1P06400 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RB1P06400 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RB1P06400 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.04■□□□□ 0.16
RB1P06400 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.04■□□□□ 0.16
RB1P06400 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RB1P06400 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.04■□□□□ 0.16
RB1P06400 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RB1P06400 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RB1P06400 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RB1P06400 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RB1P06400 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RB1P06400 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms