Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 FP236241.2-201ENST00000624906 1185 ntBASIC15.53■□□□□ 0.08
HLA-DQB2P05538 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 LINC02228-204ENST00000642115 2962 ntBASIC15.53■□□□□ 0.08
HLA-DQB2P05538 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DQB2P05538 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.52■□□□□ 0.08
HLA-DQB2P05538 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DQB2P05538 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DQB2P05538 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.52■□□□□ 0.08
HLA-DQB2P05538 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DQB2P05538 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DQB2P05538 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DQB2P05538 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DQB2P05538 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DQB2P05538 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DQB2P05538 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
HLA-DQB2P05538 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
HLA-DQB2P05538 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DQB2P05538 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.52■□□□□ 0.08
HLA-DQB2P05538 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HLA-DQB2P05538 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.52■□□□□ 0.08
HLA-DQB2P05538 AL645937.2-201ENST00000396808 931 ntBASIC15.52■□□□□ 0.08
HLA-DQB2P05538 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.52■□□□□ 0.08
HLA-DQB2P05538 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
HLA-DQB2P05538 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.52■□□□□ 0.08
HLA-DQB2P05538 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.52■□□□□ 0.08
HLA-DQB2P05538 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
HLA-DQB2P05538 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.52■□□□□ 0.08
HLA-DQB2P05538 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
HLA-DQB2P05538 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.52■□□□□ 0.08
HLA-DQB2P05538 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.52■□□□□ 0.08
HLA-DQB2P05538 MIR3197-201ENST00000582241 73 ntBASIC15.52■□□□□ 0.08
HLA-DQB2P05538 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.52■□□□□ 0.08
HLA-DQB2P05538 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.52■□□□□ 0.08
HLA-DQB2P05538 AL033527.5-201ENST00000641382 801 ntBASIC15.52■□□□□ 0.08
HLA-DQB2P05538 PRSS30P-206ENST00000641773 873 ntBASIC15.52■□□□□ 0.08
HLA-DQB2P05538 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.52■□□□□ 0.07
HLA-DQB2P05538 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
HLA-DQB2P05538 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.52■□□□□ 0.07
HLA-DQB2P05538 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HLA-DQB2P05538 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HLA-DQB2P05538 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
HLA-DQB2P05538 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HLA-DQB2P05538 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HLA-DQB2P05538 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HLA-DQB2P05538 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
HLA-DQB2P05538 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HLA-DQB2P05538 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
HLA-DQB2P05538 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.52■□□□□ 0.07
HLA-DQB2P05538 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 AL162726.2-201ENST00000438986 1017 ntBASIC15.51■□□□□ 0.07
HLA-DQB2P05538 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 AC025048.6-201ENST00000634326 1161 ntBASIC15.51■□□□□ 0.07
HLA-DQB2P05538 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.51■□□□□ 0.07
HLA-DQB2P05538 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms