Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
APOBP04114 HMGB1P24-201ENST00000611897 328 ntBASIC9.24□□□□□ -0.93
APOBP04114 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC9.24□□□□□ -0.93
APOBP04114 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC9.24□□□□□ -0.93
APOBP04114 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
APOBP04114 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC9.24□□□□□ -0.93
APOBP04114 CTBP2P8-201ENST00000422584 1330 ntBASIC9.24□□□□□ -0.93
APOBP04114 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
APOBP04114 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
APOBP04114 PYY2-201ENST00000315776 282 ntBASIC9.24□□□□□ -0.93
APOBP04114 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
APOBP04114 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
APOBP04114 GEMIN8P4-201ENST00000380526 729 ntBASIC9.24□□□□□ -0.93
APOBP04114 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC9.24□□□□□ -0.93
APOBP04114 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC9.24□□□□□ -0.93
APOBP04114 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC9.24□□□□□ -0.93
APOBP04114 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
APOBP04114 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
APOBP04114 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
APOBP04114 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
APOBP04114 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
APOBP04114 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
APOBP04114 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
APOBP04114 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC9.23□□□□□ -0.93
APOBP04114 AC090616.6-203ENST00000579186 1945 ntBASIC9.23□□□□□ -0.93
APOBP04114 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
APOBP04114 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
APOBP04114 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
APOBP04114 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
APOBP04114 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
APOBP04114 HNRNPA1P27-201ENST00000412087 955 ntBASIC9.23□□□□□ -0.93
APOBP04114 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC9.23□□□□□ -0.93
APOBP04114 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC9.23□□□□□ -0.93
APOBP04114 RBM4-207ENST00000506523 654 ntTSL 3 BASIC9.23□□□□□ -0.93
APOBP04114 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC9.23□□□□□ -0.93
APOBP04114 KRT18P37-201ENST00000520711 1282 ntBASIC9.23□□□□□ -0.93
APOBP04114 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC9.23□□□□□ -0.93
APOBP04114 MIR6720-201ENST00000611664 98 ntBASIC9.23□□□□□ -0.93
APOBP04114 CR392039.1-201ENST00000623217 204 ntBASIC9.23□□□□□ -0.93
APOBP04114 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
APOBP04114 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
APOBP04114 AC023090.2-201ENST00000625182 2110 ntBASIC9.23□□□□□ -0.93
APOBP04114 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
APOBP04114 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
APOBP04114 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
APOBP04114 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC9.23□□□□□ -0.93
APOBP04114 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
APOBP04114 RNVU1-8-201ENST00000364272 125 ntBASIC9.23□□□□□ -0.93
APOBP04114 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC9.23□□□□□ -0.93
APOBP04114 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
APOBP04114 AC063952.3-201ENST00000467756 308 ntBASIC9.23□□□□□ -0.93
APOBP04114 AREG-202ENST00000502307 956 ntTSL 5 BASIC9.23□□□□□ -0.93
APOBP04114 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC9.23□□□□□ -0.93
APOBP04114 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC9.23□□□□□ -0.93
APOBP04114 MIR6816-201ENST00000620368 66 ntBASIC9.23□□□□□ -0.93
APOBP04114 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC9.23□□□□□ -0.93
APOBP04114 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
APOBP04114 AC010491.1-201ENST00000563101 2797 ntBASIC9.23□□□□□ -0.93
APOBP04114 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
APOBP04114 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC9.23□□□□□ -0.93
APOBP04114 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC9.23□□□□□ -0.93
APOBP04114 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
APOBP04114 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC9.23□□□□□ -0.93
APOBP04114 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC9.23□□□□□ -0.93
APOBP04114 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
APOBP04114 RN7SL81P-201ENST00000493781 261 ntBASIC9.23□□□□□ -0.93
APOBP04114 AC114947.1-202ENST00000514136 344 ntBASIC9.23□□□□□ -0.93
APOBP04114 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC9.23□□□□□ -0.93
APOBP04114 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC9.23□□□□□ -0.93
APOBP04114 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC9.23□□□□□ -0.93
APOBP04114 AL022334.2-201ENST00000610000 484 ntBASIC9.23□□□□□ -0.93
APOBP04114 AC105250.1-201ENST00000509378 2057 ntBASIC9.23□□□□□ -0.93
APOBP04114 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
APOBP04114 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
APOBP04114 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC9.23□□□□□ -0.93
APOBP04114 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
APOBP04114 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
APOBP04114 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC9.22□□□□□ -0.93
APOBP04114 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC9.22□□□□□ -0.93
APOBP04114 IGHV1-12-201ENST00000518307 205 ntBASIC9.22□□□□□ -0.93
APOBP04114 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
APOBP04114 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
APOBP04114 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC9.22□□□□□ -0.93
APOBP04114 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC9.22□□□□□ -0.93
APOBP04114 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
APOBP04114 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC9.22□□□□□ -0.93
APOBP04114 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC9.22□□□□□ -0.93
APOBP04114 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC9.22□□□□□ -0.93
APOBP04114 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC9.22□□□□□ -0.93
APOBP04114 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
APOBP04114 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
APOBP04114 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC9.22□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms