Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 TLE1P1-201ENST00000422965 589 ntBASIC18.3■□□□□ 0.52
COL4A1P02462 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC18.3■□□□□ 0.52
COL4A1P02462 Z97180.1-201ENST00000445173 988 ntBASIC18.3■□□□□ 0.52
COL4A1P02462 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
COL4A1P02462 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC18.3■□□□□ 0.52
COL4A1P02462 MIR3677-201ENST00000578964 60 ntBASIC18.3■□□□□ 0.52
COL4A1P02462 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC18.3■□□□□ 0.52
COL4A1P02462 WDR7-208ENST00000589935 544 ntTSL 4 BASIC18.3■□□□□ 0.52
COL4A1P02462 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC18.3■□□□□ 0.52
COL4A1P02462 AC138894.2-201ENST00000602838 371 ntBASIC18.3■□□□□ 0.52
COL4A1P02462 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC18.3■□□□□ 0.52
COL4A1P02462 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL4A1P02462 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL4A1P02462 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL4A1P02462 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
COL4A1P02462 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL4A1P02462 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL4A1P02462 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
COL4A1P02462 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL4A1P02462 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
COL4A1P02462 TMBIM7P-202ENST00000641474 1516 ntBASIC18.3■□□□□ 0.52
COL4A1P02462 AC018629.1-201ENST00000623381 1736 ntBASIC18.3■□□□□ 0.52
COL4A1P02462 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
COL4A1P02462 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL4A1P02462 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
COL4A1P02462 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.29■□□□□ 0.52
COL4A1P02462 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COL4A1P02462 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL4A1P02462 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC18.29■□□□□ 0.52
COL4A1P02462 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.29■□□□□ 0.52
COL4A1P02462 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC18.29■□□□□ 0.52
COL4A1P02462 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL4A1P02462 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL4A1P02462 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.29■□□□□ 0.52
COL4A1P02462 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL4A1P02462 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COL4A1P02462 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
COL4A1P02462 MPRIPP1-201ENST00000452433 1089 ntBASIC18.29■□□□□ 0.52
COL4A1P02462 IGLV3-15-201ENST00000518356 244 ntBASIC18.29■□□□□ 0.52
COL4A1P02462 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC18.29■□□□□ 0.52
COL4A1P02462 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
COL4A1P02462 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC18.29■□□□□ 0.52
COL4A1P02462 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC18.29■□□□□ 0.52
COL4A1P02462 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
COL4A1P02462 IRF3-215ENST00000596822 823 ntTSL 3 BASIC18.29■□□□□ 0.52
COL4A1P02462 AL109837.1-201ENST00000603272 613 ntBASIC18.29■□□□□ 0.52
COL4A1P02462 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
COL4A1P02462 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL4A1P02462 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL4A1P02462 LINC01165-201ENST00000445190 1623 ntBASIC18.29■□□□□ 0.52
COL4A1P02462 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.29■□□□□ 0.52
COL4A1P02462 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
COL4A1P02462 SALL4P5-201ENST00000419001 1760 ntBASIC18.28■□□□□ 0.52
COL4A1P02462 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL4A1P02462 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL4A1P02462 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC18.28■□□□□ 0.52
COL4A1P02462 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC18.28■□□□□ 0.52
COL4A1P02462 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC18.28■□□□□ 0.52
COL4A1P02462 LDHBP1-201ENST00000455730 1119 ntBASIC18.28■□□□□ 0.52
COL4A1P02462 CENPX-208ENST00000584347 799 ntTSL 2 BASIC18.28■□□□□ 0.52
COL4A1P02462 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC18.28■□□□□ 0.52
COL4A1P02462 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC18.28■□□□□ 0.52
COL4A1P02462 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC18.28■□□□□ 0.52
COL4A1P02462 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
COL4A1P02462 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL4A1P02462 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL4A1P02462 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL4A1P02462 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC18.28■□□□□ 0.52
COL4A1P02462 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.28■□□□□ 0.52
COL4A1P02462 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL4A1P02462 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC18.28■□□□□ 0.52
COL4A1P02462 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
COL4A1P02462 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.28■□□□□ 0.52
COL4A1P02462 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL4A1P02462 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
COL4A1P02462 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
COL4A1P02462 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
COL4A1P02462 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
COL4A1P02462 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL4A1P02462 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
COL4A1P02462 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
COL4A1P02462 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC18.28■□□□□ 0.52
COL4A1P02462 OR2R1P-201ENST00000441404 914 ntBASIC18.28■□□□□ 0.52
COL4A1P02462 PUDPP3-201ENST00000445368 636 ntBASIC18.28■□□□□ 0.52
COL4A1P02462 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC18.28■□□□□ 0.52
COL4A1P02462 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC18.28■□□□□ 0.52
COL4A1P02462 IQSEC3P1-201ENST00000538799 536 ntBASIC18.28■□□□□ 0.52
COL4A1P02462 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC18.28■□□□□ 0.52
COL4A1P02462 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
COL4A1P02462 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.28■□□□□ 0.52
COL4A1P02462 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.28■□□□□ 0.52
COL4A1P02462 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL4A1P02462 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC18.28■□□□□ 0.52
COL4A1P02462 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.27■□□□□ 0.52
COL4A1P02462 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL4A1P02462 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL4A1P02462 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
COL4A1P02462 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL4A1P02462 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC18.27■□□□□ 0.52
COL4A1P02462 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms