Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.47■□□□□ 0.23
HLA-DRAP01903 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HLA-DRAP01903 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.47■□□□□ 0.23
HLA-DRAP01903 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.47■□□□□ 0.23
HLA-DRAP01903 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRAP01903 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.46■□□□□ 0.23
HLA-DRAP01903 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.46■□□□□ 0.23
HLA-DRAP01903 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRAP01903 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRAP01903 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.46■□□□□ 0.23
HLA-DRAP01903 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRAP01903 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRAP01903 NFIC-211ENST00000641145 8399 ntBASIC16.46■□□□□ 0.23
HLA-DRAP01903 AL596257.1-201ENST00000641463 2694 ntBASIC16.46■□□□□ 0.23
HLA-DRAP01903 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRAP01903 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRAP01903 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRAP01903 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.46■□□□□ 0.23
HLA-DRAP01903 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRAP01903 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRAP01903 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HLA-DRAP01903 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRAP01903 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRAP01903 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRAP01903 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRAP01903 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.46■□□□□ 0.23
HLA-DRAP01903 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRAP01903 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.46■□□□□ 0.23
HLA-DRAP01903 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.46■□□□□ 0.23
HLA-DRAP01903 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HLA-DRAP01903 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.46■□□□□ 0.23
HLA-DRAP01903 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.46■□□□□ 0.23
HLA-DRAP01903 RN7SL752P-201ENST00000463779 287 ntBASIC16.46■□□□□ 0.23
HLA-DRAP01903 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
HLA-DRAP01903 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.46■□□□□ 0.23
HLA-DRAP01903 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.46■□□□□ 0.23
HLA-DRAP01903 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HLA-DRAP01903 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
HLA-DRAP01903 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRAP01903 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.46■□□□□ 0.23
HLA-DRAP01903 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.46■□□□□ 0.23
HLA-DRAP01903 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRAP01903 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRAP01903 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRAP01903 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HLA-DRAP01903 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRAP01903 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.46■□□□□ 0.23
HLA-DRAP01903 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRAP01903 LILRP1-201ENST00000444199 1370 ntBASIC16.46■□□□□ 0.23
HLA-DRAP01903 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRAP01903 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HLA-DRAP01903 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRAP01903 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
HLA-DRAP01903 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRAP01903 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRAP01903 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DRAP01903 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
HLA-DRAP01903 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HLA-DRAP01903 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
HLA-DRAP01903 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
HLA-DRAP01903 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
HLA-DRAP01903 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HLA-DRAP01903 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
HLA-DRAP01903 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.45■□□□□ 0.22
HLA-DRAP01903 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DRAP01903 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DRAP01903 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DRAP01903 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.45■□□□□ 0.22
HLA-DRAP01903 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DRAP01903 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DRAP01903 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HLA-DRAP01903 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DRAP01903 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DRAP01903 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DRAP01903 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DRAP01903 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.45■□□□□ 0.22
HLA-DRAP01903 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DRAP01903 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DRAP01903 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.45■□□□□ 0.22
HLA-DRAP01903 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
HLA-DRAP01903 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DRAP01903 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DRAP01903 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HLA-DRAP01903 AL139094.1-201ENST00000405549 1188 ntBASIC16.45■□□□□ 0.22
HLA-DRAP01903 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.45■□□□□ 0.22
HLA-DRAP01903 AC093433.1-201ENST00000458048 571 ntBASIC16.45■□□□□ 0.22
HLA-DRAP01903 RN7SL837P-201ENST00000463010 287 ntBASIC16.45■□□□□ 0.22
HLA-DRAP01903 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.45■□□□□ 0.22
HLA-DRAP01903 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HLA-DRAP01903 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.45■□□□□ 0.22
HLA-DRAP01903 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
HLA-DRAP01903 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DRAP01903 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DRAP01903 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.45■□□□□ 0.22
HLA-DRAP01903 AP001063.1-201ENST00000568332 529 ntBASIC16.45■□□□□ 0.22
HLA-DRAP01903 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.45■□□□□ 0.22
HLA-DRAP01903 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DRAP01903 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.45■□□□□ 0.22
HLA-DRAP01903 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HLA-DRAP01903 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms