Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LTN1O94822 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LTN1O94822 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
LTN1O94822 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LTN1O94822 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
LTN1O94822 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LTN1O94822 XBP1P1-201ENST00000436573 652 ntBASIC19.8■□□□□ 0.76
LTN1O94822 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC19.8■□□□□ 0.76
LTN1O94822 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LTN1O94822 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC19.8■□□□□ 0.76
LTN1O94822 HPN-206ENST00000597419 1212 ntTSL 5 BASIC19.8■□□□□ 0.76
LTN1O94822 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC19.8■□□□□ 0.76
LTN1O94822 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC19.8■□□□□ 0.76
LTN1O94822 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LTN1O94822 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
LTN1O94822 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LTN1O94822 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LTN1O94822 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
LTN1O94822 TMBIM7P-202ENST00000641474 1516 ntBASIC19.79■□□□□ 0.76
LTN1O94822 PRAL-201ENST00000624952 3286 ntBASIC19.79■□□□□ 0.76
LTN1O94822 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LTN1O94822 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC19.79■□□□□ 0.76
LTN1O94822 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
LTN1O94822 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LTN1O94822 FAS-202ENST00000352159 1722 ntTSL 5 BASIC19.79■□□□□ 0.76
LTN1O94822 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LTN1O94822 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LTN1O94822 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC19.79■□□□□ 0.76
LTN1O94822 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LTN1O94822 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LTN1O94822 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LTN1O94822 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
LTN1O94822 AP000358.1-201ENST00000456260 156 ntBASIC19.79■□□□□ 0.76
LTN1O94822 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC19.79■□□□□ 0.76
LTN1O94822 RN7SL8P-201ENST00000461771 266 ntBASIC19.79■□□□□ 0.76
LTN1O94822 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC19.79■□□□□ 0.76
LTN1O94822 MBP-227ENST00000526111 581 ntTSL 4 BASIC19.79■□□□□ 0.76
LTN1O94822 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC19.79■□□□□ 0.76
LTN1O94822 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LTN1O94822 AC009884.2-201ENST00000603110 324 ntBASIC19.79■□□□□ 0.76
LTN1O94822 AC242376.2-201ENST00000619355 883 ntBASIC19.79■□□□□ 0.76
LTN1O94822 AL805961.1-201ENST00000642026 753 ntBASIC19.79■□□□□ 0.76
LTN1O94822 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LTN1O94822 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LTN1O94822 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LTN1O94822 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LTN1O94822 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
LTN1O94822 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LTN1O94822 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC19.79■□□□□ 0.76
LTN1O94822 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LTN1O94822 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC19.79■□□□□ 0.76
LTN1O94822 AC136621.1-201ENST00000624017 2304 ntBASIC19.79■□□□□ 0.76
LTN1O94822 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.79■□□□□ 0.76
LTN1O94822 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LTN1O94822 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC19.79■□□□□ 0.76
LTN1O94822 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LTN1O94822 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
LTN1O94822 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LTN1O94822 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LTN1O94822 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LTN1O94822 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LTN1O94822 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LTN1O94822 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC19.78■□□□□ 0.76
LTN1O94822 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LTN1O94822 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LTN1O94822 AC078991.1-201ENST00000437297 610 ntBASIC19.78■□□□□ 0.76
LTN1O94822 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LTN1O94822 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC19.78■□□□□ 0.76
LTN1O94822 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
LTN1O94822 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
LTN1O94822 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.78■□□□□ 0.76
LTN1O94822 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC19.78■□□□□ 0.76
LTN1O94822 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC19.78■□□□□ 0.76
LTN1O94822 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LTN1O94822 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
LTN1O94822 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC19.78■□□□□ 0.76
LTN1O94822 MIR3188-201ENST00000583494 85 ntBASIC19.78■□□□□ 0.76
LTN1O94822 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC19.78■□□□□ 0.76
LTN1O94822 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LTN1O94822 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LTN1O94822 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LTN1O94822 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LTN1O94822 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC19.78■□□□□ 0.76
LTN1O94822 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LTN1O94822 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC19.78■□□□□ 0.76
LTN1O94822 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC19.78■□□□□ 0.76
LTN1O94822 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
LTN1O94822 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC19.78■□□□□ 0.76
LTN1O94822 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC19.78■□□□□ 0.76
LTN1O94822 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC19.78■□□□□ 0.76
LTN1O94822 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC19.78■□□□□ 0.76
LTN1O94822 AC073352.2-201ENST00000609385 439 ntBASIC19.78■□□□□ 0.76
LTN1O94822 AC005618.3-201ENST00000624928 458 ntBASIC19.78■□□□□ 0.76
LTN1O94822 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LTN1O94822 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC19.77■□□□□ 0.76
LTN1O94822 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC19.77■□□□□ 0.76
LTN1O94822 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC19.77■□□□□ 0.76
LTN1O94822 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC19.77■□□□□ 0.76
LTN1O94822 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LTN1O94822 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms