Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
UPK1BO75841 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UPK1BO75841 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
UPK1BO75841 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UPK1BO75841 MIR497HG-202ENST00000572453 3838 ntBASIC13.38□□□□□ -0.27
UPK1BO75841 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK1BO75841 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
UPK1BO75841 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
UPK1BO75841 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
UPK1BO75841 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
UPK1BO75841 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
UPK1BO75841 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
UPK1BO75841 AC111170.3-201ENST00000624282 2464 ntBASIC13.37□□□□□ -0.27
UPK1BO75841 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.37□□□□□ -0.27
UPK1BO75841 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.37□□□□□ -0.27
UPK1BO75841 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.37□□□□□ -0.27
UPK1BO75841 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
UPK1BO75841 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC13.37□□□□□ -0.27
UPK1BO75841 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 PMS2P4-201ENST00000412466 1052 ntBASIC13.37□□□□□ -0.27
UPK1BO75841 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.37□□□□□ -0.27
UPK1BO75841 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.37□□□□□ -0.27
UPK1BO75841 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC13.37□□□□□ -0.27
UPK1BO75841 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
UPK1BO75841 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.37□□□□□ -0.27
UPK1BO75841 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.37□□□□□ -0.27
UPK1BO75841 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.37□□□□□ -0.27
UPK1BO75841 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.37□□□□□ -0.27
UPK1BO75841 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
UPK1BO75841 AL354702.1-201ENST00000442006 1960 ntBASIC13.37□□□□□ -0.27
UPK1BO75841 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
UPK1BO75841 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.37□□□□□ -0.27
UPK1BO75841 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
UPK1BO75841 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.37□□□□□ -0.27
UPK1BO75841 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.37□□□□□ -0.27
UPK1BO75841 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.37□□□□□ -0.27
UPK1BO75841 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.37□□□□□ -0.27
UPK1BO75841 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.37□□□□□ -0.27
UPK1BO75841 AC007787.1-201ENST00000588095 1583 ntBASIC13.37□□□□□ -0.27
UPK1BO75841 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
UPK1BO75841 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.37□□□□□ -0.27
UPK1BO75841 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UPK1BO75841 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK1BO75841 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK1BO75841 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK1BO75841 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK1BO75841 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.36□□□□□ -0.27
UPK1BO75841 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK1BO75841 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK1BO75841 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
UPK1BO75841 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK1BO75841 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
UPK1BO75841 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK1BO75841 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
UPK1BO75841 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK1BO75841 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK1BO75841 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.36□□□□□ -0.27
UPK1BO75841 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK1BO75841 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UPK1BO75841 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UPK1BO75841 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UPK1BO75841 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.36□□□□□ -0.27
UPK1BO75841 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.36□□□□□ -0.27
UPK1BO75841 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
UPK1BO75841 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
UPK1BO75841 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
UPK1BO75841 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.36□□□□□ -0.27
UPK1BO75841 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.36□□□□□ -0.27
UPK1BO75841 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.36□□□□□ -0.27
UPK1BO75841 AC142381.4-202ENST00000563973 229 ntBASIC13.36□□□□□ -0.27
UPK1BO75841 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms