Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM3O75382 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRIM3O75382 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.39□□□□□ -0.11
TRIM3O75382 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM3O75382 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRIM3O75382 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TRIM3O75382 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.38□□□□□ -0.11
TRIM3O75382 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM3O75382 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.38□□□□□ -0.11
TRIM3O75382 AL109954.1-202ENST00000564051 2148 ntBASIC14.38□□□□□ -0.11
TRIM3O75382 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.38□□□□□ -0.11
TRIM3O75382 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM3O75382 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM3O75382 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
TRIM3O75382 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.38□□□□□ -0.11
TRIM3O75382 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM3O75382 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
TRIM3O75382 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.38□□□□□ -0.11
TRIM3O75382 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TRIM3O75382 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM3O75382 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.38□□□□□ -0.11
TRIM3O75382 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.38□□□□□ -0.11
TRIM3O75382 MIR4313-201ENST00000580760 101 ntBASIC14.38□□□□□ -0.11
TRIM3O75382 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.38□□□□□ -0.11
TRIM3O75382 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.38□□□□□ -0.11
TRIM3O75382 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.38□□□□□ -0.11
TRIM3O75382 AL358472.5-202ENST00000641448 1267 ntBASIC14.38□□□□□ -0.11
TRIM3O75382 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.38□□□□□ -0.11
TRIM3O75382 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
TRIM3O75382 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM3O75382 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.38□□□□□ -0.11
TRIM3O75382 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM3O75382 AC007191.1-201ENST00000623179 2995 ntBASIC14.38□□□□□ -0.11
TRIM3O75382 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM3O75382 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM3O75382 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM3O75382 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRIM3O75382 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM3O75382 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM3O75382 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM3O75382 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.38□□□□□ -0.11
TRIM3O75382 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
TRIM3O75382 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM3O75382 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRIM3O75382 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TRIM3O75382 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM3O75382 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM3O75382 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM3O75382 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
TRIM3O75382 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TRIM3O75382 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM3O75382 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM3O75382 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.37□□□□□ -0.11
TRIM3O75382 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
TRIM3O75382 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM3O75382 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM3O75382 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM3O75382 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM3O75382 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TRIM3O75382 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TRIM3O75382 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.37□□□□□ -0.11
TRIM3O75382 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRIM3O75382 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM3O75382 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.37□□□□□ -0.11
TRIM3O75382 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.37□□□□□ -0.11
TRIM3O75382 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.37□□□□□ -0.11
TRIM3O75382 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.37□□□□□ -0.11
TRIM3O75382 AC005225.4-201ENST00000557330 545 ntBASIC14.37□□□□□ -0.11
TRIM3O75382 AL596325.1-201ENST00000563991 1082 ntBASIC14.37□□□□□ -0.11
TRIM3O75382 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.37□□□□□ -0.11
TRIM3O75382 AL158212.4-201ENST00000624062 1286 ntBASIC14.37□□□□□ -0.11
TRIM3O75382 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.37□□□□□ -0.11
TRIM3O75382 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.37□□□□□ -0.11
TRIM3O75382 TMBIM7P-203ENST00000641617 1718 ntBASIC14.37□□□□□ -0.11
TRIM3O75382 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TRIM3O75382 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM3O75382 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM3O75382 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM3O75382 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM3O75382 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
TRIM3O75382 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.37□□□□□ -0.11
TRIM3O75382 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM3O75382 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM3O75382 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM3O75382 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM3O75382 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.37□□□□□ -0.11
TRIM3O75382 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRIM3O75382 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM3O75382 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
TRIM3O75382 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRIM3O75382 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM3O75382 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM3O75382 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM3O75382 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.36□□□□□ -0.11
TRIM3O75382 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.36□□□□□ -0.11
TRIM3O75382 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM3O75382 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM3O75382 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM3O75382 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRIM3O75382 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms